RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ATP2C2O75185 946 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 ABLIM3O94929 683 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 SEC24AO95486 1093 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 SERPINC1P01008 464 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRRT-211ENST00000478693 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 TWF1Q12792 350 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 DUSP4Q13115 394 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 VEPH1Q14D04 833 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 TAF12Q16514 161 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 CCDC142Q17RM4 750 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 FILIP1LQ4L180 1135 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 MIIPQ5JXC2 388 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 RRAGAQ7L523 313 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 ACOT1Q86TX2 421 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 ARHGEF19Q8IW93 802 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 SMRP1Q8NCR6 262 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 MSLNLQ96KJ4 702 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 LSM14BQ9BX40 385 aaKnown RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 NT5C1AQ9BXI3 368 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 TMLHEQ9NVH6 421 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 MAFFQ9ULX9 164 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 USP15Q9Y4E8 981 aaPredicted RBP12.13□□□□□ -0.47
SRRT-211ENST00000478693 PLXNA3P51805 1871 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 MBTPS2O43462 519 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 CILPO75339 1184 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 SOAT2O75908 522 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 ZNF18P17022 549 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 PTPN1P18031 435 aaKnown RBP12.12□□□□□ -0.47
SRRT-211ENST00000478693 SLC9A1P19634 815 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 ANXA13P27216 316 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 HOXA9P31269 272 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 MTHFRP42898 656 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 TUFMP49411 452 aaKnown RBP12.12□□□□□ -0.47
SRRT-211ENST00000478693 KCNQ1P51787 676 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 EPHB3P54753 998 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 MFAP3P55082 362 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 IQCB1Q15051 598 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 IQCEQ6IPM2 695 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 LRRTM3Q86VH5 581 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
SRRT-211ENST00000478693 SCN4BQ8IWT1 228 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 TTC9BQ8N6N2 239 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 CMASQ8NFW8 434 aaPredicted RBP12.12□□□□□ -0.47
SRRT-211ENST00000478693 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
SRRT-211ENST00000478693 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 PRKD2Q9BZL6 878 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
SRRT-211ENST00000478693 CRTAC1Q9NQ79 661 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 FAM49BQ9NUQ9 324 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 PCDHB4Q9Y5E5 795 aa12.12□□□□□ -0.47
SRRT-211ENST00000478693 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
SRRT-211ENST00000478693 KRT5P13647 590 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 CD19P15391 556 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 BDNFP23560 247 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 ADORA2BP29275 332 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 GRIK1P39086 918 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 GCNT1Q02742 428 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 UBXN1Q04323 297 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 CBX2Q14781 532 aaPredicted RBP12.11□□□□□ -0.47
SRRT-211ENST00000478693 ARHGAP44Q17R89 818 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 RTL10Q7L3V2 364 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 GPR149Q86SP6 731 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 RNF214Q8ND24 703 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
SRRT-211ENST00000478693 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 MYCBPAPQ8TBZ2 947 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 KAT5Q92993 513 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRRT-211ENST00000478693 ZNF512Q96ME7 567 aaPredicted RBP12.11□□□□□ -0.47
SRRT-211ENST00000478693 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
SRRT-211ENST00000478693 NECTIN4Q96NY8 510 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 LPIN3Q9BQK8 851 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 RHOBTB2Q9BYZ6 727 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 S1PR5Q9H228 398 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 CRISPLD1Q9H336 500 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 CDH22Q9UJ99 828 aa12.11□□□□□ -0.47
SRRT-211ENST00000478693 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms