RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KCNK18Q7Z418 384 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 TSTD1Q8NFU3 115 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 SPPL2BQ8TCT7 592 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 DSEQ9UL01 958 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 HAPLN1P10915 354 aaPredicted RBP21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 TRAPPC10P48553 1259 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 CDR1P51861 262 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 ANAPC15P60006 121 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 SMARCB1Q12824 385 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 USP39Q53GS9 565 aaKnown RBP21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 TXNDC8Q6A555 127 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 MON1AQ86VX9 555 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 DEFB124Q8NES8 71 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 CD101Q93033 1021 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 ECT2Q9H8V3 914 aa21.91■■□□□ 1.1
PDLIM1-202ENST00000477757 ANK1P16157 1881 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 PP2D1A8MPX8 630 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 ST3GAL1Q11201 340 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 MTF1Q14872 753 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 C9orf57Q5W0N0 161 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 KRT79Q5XKE5 535 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 RASSF3Q86WH2 238 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 MRPS31Q92665 395 aaKnown RBP21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 BICD1Q96G01 975 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 TPSD1Q9BZJ3 242 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 EVLQ9UI08 416 aaPredicted RBP21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 INVSQ9Y283 1065 aa21.9■■□□□ 1.1
PDLIM1-202ENST00000477757 GCN1Q92616 2671 aaKnown RBP21.89■■□□□ 1.1
PDLIM1-202ENST00000477757 PIRO00625 290 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 BCKDHBP21953 392 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 IRX4P78413 519 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 RAD51AP2Q09MP3 1159 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 NBR1Q14596 966 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 JADE1Q6IE81 842 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 KIAA1211LQ6NV74 962 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 CCDC26Q8TAB7 109 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 KCNN1Q92952 543 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 ATP2A3Q93084 1043 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 CNOT6LQ96LI5 555 aaKnown RBP21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 RPF1Q9H9Y2 349 aaKnown RBP21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 ABI2Q9NYB9 513 aaPredicted RBP21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 ABCA7Q8IZY2 2146 aa21.89■■□□□ 1.09
PDLIM1-202ENST00000477757 MYH11P35749 1972 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 ZNF638Q14966 1978 aaKnown RBP21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 ANO9A1A5B4 782 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 H0YCG3 227 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 OGTO15294 1046 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 HYAL3O43820 417 aaPredicted RBP21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 USP4Q13107 963 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 PSMD2Q13200 908 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 ZNF77Q15935 545 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 UAP1L1Q3KQV9 507 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 LRRTM3Q86VH5 581 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 METTL23Q86XA0 190 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 CD302Q8IX05 232 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 OSCP1Q8WVF1 389 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 C8orf76Q96K31 380 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 DUS2Q9NX74 493 aaKnown RBP21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 NOL7Q9UMY1 257 aaKnown RBP21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 MSRB2Q9Y3D2 182 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 ASCC3Q8N3C0 2202 aaKnown RBP21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 THADAQ6YHU6 1953 aa21.88■■□□□ 1.09
PDLIM1-202ENST00000477757 LOC400499M0QZD8 3231 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 HNRNPDLO14979 420 aaKnown RBP21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 TADA3O75528 432 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 NFICP08651 508 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 LIG4P49917 911 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 NCKAP1LP55160 1127 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 FAM160A1Q05DH4 1040 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 LMAN2Q12907 356 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 ANO7Q6IWH7 933 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 THEM5Q8N1Q8 247 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 USP33Q8TEY7 942 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 MMTAG2Q9BU76 263 aaKnown RBP21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 TMEM206Q9H813 350 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 DERAQ9Y315 318 aa21.87■■□□□ 1.09
PDLIM1-202ENST00000477757 LAMA5O15230 3695 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 PIGRP01833 764 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 CSH1P0DML2 217 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 CSH2P0DML3 217 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 CDC25AP30304 524 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 DHPSP49366 369 aaPredicted RBP21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 TMEM132DQ14C87 1099 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 EML3Q32P44 896 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 STKLD1Q8NE28 680 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 MDGA1Q8NFP4 955 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 PIGKQ92643 395 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 PYM1Q9BRP8 204 aaKnown RBP21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 CCSER1Q9C0I3 900 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 SLC32A1Q9H598 525 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 KCND2Q9NZV8 630 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 KLK13Q9UKR3 277 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 PCDHB5Q9Y5E4 795 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 WNT6Q9Y6F9 365 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 CACNA1EQ15878 2313 aa21.86■■□□□ 1.09
PDLIM1-202ENST00000477757 SCN1AP35498 2009 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 TNRC6BQ9UPQ9 1833 aaKnown RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 TAF4O00268 1085 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 CYB561D2O14569 222 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 IFNAR2P48551 515 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms