RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SCN5AQ14524 2016 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 TULP2O00295 520 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 ATP2C2O75185 946 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 KIF4AO95239 1232 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 ITGB8P26012 769 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 GATMP50440 423 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 MESDQ14696 234 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 WHAMMP3Q1A5X7 153 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 CYP4A22Q5TCH4 519 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 PEX26Q7Z412 305 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 TET1Q8NFU7 2136 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 HES6Q96HZ4 224 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 SNX25Q9H3E2 840 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 C11orf49Q9H6J7 331 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 TMEM161AQ9NX61 479 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 EHD2Q9NZN4 543 aa15.32■□□□□ 0.04
COL4A6-206ENST00000477085 M0QYV0 167 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
COL4A6-206ENST00000477085 TADA3O75528 432 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 GABBR2O75899 941 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 B3GAT3O94766 335 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ACAT1P24752 427 aaKnown RBP15.31■□□□□ 0.04
COL4A6-206ENST00000477085 BRCC3P46736 316 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 DSC1Q08554 894 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 RPS6KA1Q15418 735 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 GOLGA7BQ2TAP0 167 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ARHGAP17Q68EM7 881 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 C11orf63Q6NUN7 778 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 GLB1LQ6UWU2 654 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ERICH1Q86X53 443 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 SYCE1Q8N0S2 351 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 HASPINQ8TF76 798 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 TRIM11Q96F44 468 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
COL4A6-206ENST00000477085 TMEM110-MUSTN1A8MSY1 372 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ERBB2P04626 1255 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 CCDC130P13994 396 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 COMTP21964 271 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 CDR1P51861 262 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 RPL7AP62424 266 aaKnown RBP15.31■□□□□ 0.04
COL4A6-206ENST00000477085 PPP1R15BQ5SWA1 713 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 COLGALT2Q8IYK4 626 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 APBB2Q92870 758 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 DDX27Q96GQ7 796 aaKnown RBP15.31■□□□□ 0.04
COL4A6-206ENST00000477085 CASD1Q96PB1 797 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 RTP3Q9BQQ7 232 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 TBC1D13Q9NVG8 400 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
COL4A6-206ENST00000477085 FAM163BP0C2L3 166 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
COL4A6-206ENST00000477085 TKTP29401 623 aaKnown RBP15.3■□□□□ 0.04
COL4A6-206ENST00000477085 PSMC1P62191 440 aaKnown RBP15.3■□□□□ 0.04
COL4A6-206ENST00000477085 PDCLQ13371 301 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 LIN9Q5TKA1 542 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 CD101Q93033 1021 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 CALR3Q96L12 384 aaKnown RBP15.3■□□□□ 0.04
COL4A6-206ENST00000477085 TMEM39AQ9NV64 488 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 CEP83Q9Y592 693 aa15.3■□□□□ 0.04
COL4A6-206ENST00000477085 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 CALB1P05937 261 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 CLTBP09497 229 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 GABRB2P47870 512 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 OGDHQ02218 1023 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 DCAF12L1Q5VU92 463 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 DAB2IPQ5VWQ8 1189 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PMF1Q6P1K2 205 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PAQR9Q6ZVX9 377 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 RSRC2Q7L4I2 434 aaKnown RBP15.29■□□□□ 0.04
COL4A6-206ENST00000477085 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 SLC35F5Q8WV83 523 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 ALG3Q92685 438 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 KRT35Q92764 455 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
COL4A6-206ENST00000477085 UROC1Q96N76 676 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PARVAQ9NVD7 372 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 DDX43Q9NXZ2 648 aaKnown RBP15.29■□□□□ 0.04
COL4A6-206ENST00000477085 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PCDHB7Q9Y5E2 793 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
COL4A6-206ENST00000477085 TMEM191CA6NGB0 347 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 M0QZQ0 153 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PIK3R2O00459 728 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 KCNK3O14649 394 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 PTPN1P18031 435 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms