RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 SGPL1O95470 568 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 ITGB3P05106 788 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CFHP08603 1231 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 GRM5P41594 1212 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 KIF11P52732 1056 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 BLMHQ13867 455 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 THEMIS2Q5TEJ8 643 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CHD9Q3L8U1 2897 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 RALGAPA2Q2PPJ7 1873 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 A6NHS1 94 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CCT8L1PA6NM43 557 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 KRT19P08727 400 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 MYZAPP0CAP1 466 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 HSPA1AP0DMV8 641 aaKnown RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 HSPA1BP0DMV9 641 aaKnown RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 ALADP13716 330 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SOX5P35711 763 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 PTK7Q13308 1070 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 ORC1Q13415 861 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 ASIC2Q16515 512 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 FAM126BQ8IXS8 530 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 DRAXINQ8NBI3 349 aaPredicted RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SNX27Q96L92 541 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 TAS2R14Q9NYV8 317 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SMARCAL1Q9NZC9 954 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 RNF14Q9UBS8 474 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SALL4Q9UJQ4 1053 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 SLC12A4Q9UP95 1085 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CFAP73A6NFT4 308 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 CABYRO75952 493 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 SPA17Q15506 151 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 RTN4RL1Q86UN2 441 aaPredicted RBP12.78□□□□□ -0.36
XPC-205ENST00000476581 IFT81Q8WYA0 676 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■■■□ 21.4
XPC-205ENST00000476581 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 EHD2Q9NZN4 543 aa12.78□□□□□ -0.36
XPC-205ENST00000476581 WEE2P0C1S8 567 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 NEFHP12036 1026 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 CDH8P55286 799 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 GUCY2DQ02846 1103 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 SNX1Q13596 522 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.36
XPC-205ENST00000476581 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 MFN1Q8IWA4 741 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 CCDC42Q96M95 316 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 SYT11Q9BT88 431 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.36
XPC-205ENST00000476581 ERVK-5Q9HDB9 667 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 PARP2Q9UGN5 583 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 PCDHB2Q9Y5E7 798 aa12.77□□□□□ -0.36
XPC-205ENST00000476581 TTC36A6NLP5 189 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 M0QZ92 97 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.374e-7■■■□□ 17.9
XPC-205ENST00000476581 CAND2O75155 1236 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
XPC-205ENST00000476581 SERPING1P05155 500 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 LINGO3P0C6S8 592 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
XPC-205ENST00000476581 ACO1P21399 889 aaKnown RBP12.77□□□□□ -0.37
XPC-205ENST00000476581 DRD4P21917 467 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 POLR2BP30876 1174 aaKnown RBP12.77□□□□□ -0.37
XPC-205ENST00000476581 CXCR5P32302 372 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 CDC42EP1Q00587 391 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 NOP9Q86U38 636 aaKnown RBP12.77□□□□□ -0.37
XPC-205ENST00000476581 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 NT5C1BQ96P26 610 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
XPC-205ENST00000476581 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.77□□□□□ -0.37
XPC-205ENST00000476581 ESYT3A0FGR9 886 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 MOCS3O95396 460 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
XPC-205ENST00000476581 CD58P19256 250 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 CETN1Q12798 172 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
XPC-205ENST00000476581 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
XPC-205ENST00000476581 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms