RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 CHRNA3P32297 505 aa24.37■■□□□ 1.49
CCDC7-206ENST00000476558 CUL1Q13616 776 aa24.37■■□□□ 1.49
CCDC7-206ENST00000476558 SMC1AQ14683 1233 aaKnown RBP24.37■■□□□ 1.49
CCDC7-206ENST00000476558 C12orf50Q8NA57 414 aaPredicted RBP24.37■■□□□ 1.49
CCDC7-206ENST00000476558 CD99L2Q8TCZ2 262 aa24.37■■□□□ 1.49
CCDC7-206ENST00000476558 GDAP1L1Q96MZ0 367 aa24.37■■□□□ 1.49
CCDC7-206ENST00000476558 M0QYV0 167 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 ERBB2P04626 1255 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 PFKMP08237 780 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 RARAP10276 462 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 PNPLA4P41247 253 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 TNNT3P45378 269 aaPredicted RBP24.36■■□□□ 1.49
CCDC7-206ENST00000476558 PDCLQ13371 301 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 DHX34Q14147 1143 aaKnown RBP24.36■■□□□ 1.49
CCDC7-206ENST00000476558 PKDCCQ504Y2 493 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 DCUN1D2Q6PH85 259 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 IFT81Q8WYA0 676 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 MCRS1Q96EZ8 462 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 PPP1R10Q96QC0 940 aaKnown RBP24.36■■□□□ 1.49
CCDC7-206ENST00000476558 DDX20Q9UHI6 824 aaKnown RBP24.36■■□□□ 1.49
CCDC7-206ENST00000476558 DNAH12Q6ZR08 3092 aa24.36■■□□□ 1.49
CCDC7-206ENST00000476558 KPNA7A9QM74 516 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 CTSHP09668 335 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 LRPAP1P30533 357 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 PTGIRP43119 386 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 PIGHQ14442 188 aaPredicted RBP24.35■■□□□ 1.49
CCDC7-206ENST00000476558 PTGISQ16647 500 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 LRRC38Q5VT99 294 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 SND1Q7KZF4 910 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCDC7-206ENST00000476558 C12orf29Q8N999 325 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 FNIP1Q8TF40 1166 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 ZNF560Q96MR9 790 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 AGO3Q9H9G7 860 aaKnown RBP24.35■■□□□ 1.49
CCDC7-206ENST00000476558 FAM105AQ9NUU6 356 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 TSPAN16Q9UKR8 245 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 MTUS1Q9ULD2 1270 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 FAM187AA6NFU0 413 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 RFC1P35251 1148 aaPredicted RBP24.35■■□□□ 1.49
CCDC7-206ENST00000476558 PSMC1P62191 440 aaKnown RBP24.35■■□□□ 1.49
CCDC7-206ENST00000476558 DR1Q01658 176 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 TTC27Q6P3X3 843 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 GSTCDQ8NEC7 633 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 EXD1Q8NHP7 514 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 PXYLP1Q8TE99 480 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 KBTBD7Q8WVZ9 684 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 OSBPL7Q9BZF2 842 aa24.35■■□□□ 1.49
CCDC7-206ENST00000476558 A0A0U1RQG5 324 aaPredicted RBP24.34■■□□□ 1.49
CCDC7-206ENST00000476558 F8VP50 259 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 FAM153BP0C7A2 387 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 KRT3P12035 628 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 FAM153CQ494X1 144 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 ACOT1Q86TX2 421 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 UBA3Q8TBC4 463 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 MAGOHBQ96A72 148 aaKnown RBP24.34■■□□□ 1.49
CCDC7-206ENST00000476558 HERPUD2Q9BSE4 406 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 LRRC19Q9H756 370 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 GOLGA2P5Q9HBQ8 144 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 FAM153AQ9UHL3 310 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 USTQ9Y2C2 406 aa24.34■■□□□ 1.49
CCDC7-206ENST00000476558 MEIS3P2A8K0S8 358 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 GPR182O15218 404 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 CABYRO75952 493 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 TCF4P15884 667 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 AARSP49588 968 aaKnown RBP eCLIP24.33■■□□□ 1.49
CCDC7-206ENST00000476558 TAF6P49848 677 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 NFX1Q12986 1120 aaKnown RBP24.33■■□□□ 1.49
CCDC7-206ENST00000476558 PPP1R26Q5T8A7 1209 aaPredicted RBP24.33■■□□□ 1.49
CCDC7-206ENST00000476558 CRYBG2Q8N1P7 616 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 HTTP42858 3142 aa24.33■■□□□ 1.49
CCDC7-206ENST00000476558 GNRH1P01148 92 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 THPOP40225 353 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 APLP1P51693 650 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 KLF1Q13351 362 aaPredicted RBP24.33■■□□□ 1.48
CCDC7-206ENST00000476558 ITGA7Q13683 1181 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 TRIM71Q2Q1W2 868 aaKnown RBP24.33■■□□□ 1.48
CCDC7-206ENST00000476558 ARHGAP17Q68EM7 881 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 DUPD1Q68J44 220 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 MRPL10Q7Z7H8 261 aaKnown RBP24.33■■□□□ 1.48
CCDC7-206ENST00000476558 JOSD2Q8TAC2 188 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 ZFP42Q96MM3 310 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 TRAIPQ9BWF2 469 aa24.33■■□□□ 1.48
CCDC7-206ENST00000476558 UTP11Q9Y3A2 253 aaKnown RBP24.33■■□□□ 1.48
CCDC7-206ENST00000476558 GOLGA8SH3BPF8 625 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 H3BQF6 201 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 FGFR1P11362 822 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 COILP38432 576 aaPredicted RBP24.32■■□□□ 1.48
CCDC7-206ENST00000476558 ACLYP53396 1101 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 LILRA4P59901 499 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 PTK7Q13308 1070 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 SV2CQ496J9 727 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 FAM26DQ5JW98 314 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 RNF180Q86T96 592 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 DDX42Q86XP3 938 aaKnown RBP eCLIP24.32■■□□□ 1.48
CCDC7-206ENST00000476558 JAMLQ86YT9 394 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 MREGQ8N565 214 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 MAIP1Q8WWC4 291 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 ERP44Q9BS26 406 aa24.32■■□□□ 1.48
CCDC7-206ENST00000476558 MYCNP04198 464 aaPredicted RBP24.31■■□□□ 1.48
CCDC7-206ENST00000476558 MAP2K2P36507 400 aa24.31■■□□□ 1.48
CCDC7-206ENST00000476558 FNTAP49354 379 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms