RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CRYGNQ8WXF5 182 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 DDX27Q96GQ7 796 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 PGBD1Q96JS3 809 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 AK8Q96MA6 479 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 POLR3CQ9BUI4 534 aaPredicted RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 NIFKQ9BYG3 293 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 RAB34Q9BZG1 259 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 FBXO2Q9UK22 296 aaPredicted RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 INSL5Q9Y5Q6 135 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 STK24Q9Y6E0 443 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 DENND4CQ5VZ89 1909 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 IPO5O00410 1097 aaKnown RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 SLC26A4O43511 780 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 NEMFO60524 1076 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 CCNT1O60563 726 aaKnown RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 PSAPP07602 524 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 OR52Z1P0C646 297 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 MYL4P12829 197 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 MARCKSP29966 332 aaPredicted RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 PLCB2Q00722 1185 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 KCNH2Q12809 1159 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 TUSC3Q13454 348 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 RUNX3Q13761 415 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 PDIA5Q14554 519 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 Q4G0T1 1027 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 ANO7Q6IWH7 933 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 GAREM2Q75VX8 874 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 RHPN2Q8IUC4 686 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 SMAP1Q8IYB5 467 aaPredicted RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 SLFN12Q8IYM2 578 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 C4orf32Q8N8J7 132 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 FSIP1Q8NA03 581 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 LEMD2Q8NC56 503 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 GPT2Q8TD30 523 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 BPIFB1Q8TDL5 484 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 USP33Q8TEY7 942 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 ACDQ96AP0 544 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 FAM20AQ96MK3 541 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 TIGD1Q96MW7 591 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 NXF3Q9H4D5 531 aaKnown RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 GKN1Q9NS71 199 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 NRBP2Q9NSY0 501 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 SUCLA2Q9P2R7 463 aaPredicted RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 HOOK1Q9UJC3 728 aaKnown RBP7.06□□□□□ -1.28
CLDN4-205ENST00000476494 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
CLDN4-205ENST00000476494 A0A1W2PRU2 124 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 TMEM150BA6NC51 233 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CASTOR2A6NHX0 329 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 TMEM189-UBE2V1I3L0A0 370 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 PTGESO14684 152 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 ADAMTS3O15072 1205 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 MARCH6O60337 910 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 VNN2O95498 520 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 AFPP02771 609 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 SYPP08247 313 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 AKAP5P24588 427 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 TKTP29401 623 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 TXLNAP40222 546 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 FXR2P51116 673 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 PRKCEQ02156 737 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 SEMG2Q02383 582 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 ELAVL2Q12926 359 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CRY1Q16526 586 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CALCRLQ16602 461 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC183Q5T5S1 534 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CAVIN1Q6NZI2 390 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 HAUS6Q7Z4H7 955 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 SRGAP1Q7Z6B7 1085 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 ERICH1Q86X53 443 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 SLC41A1Q8IVJ1 513 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 KCTD17Q8N5Z5 321 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 ENGASEQ8NFI3 743 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 RIN3Q8TB24 985 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 WHAMMQ8TF30 809 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 TSC1Q92574 1164 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 FGF11Q92914 225 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 NXPE2Q96DL1 559 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF512Q96ME7 567 aaPredicted RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 NLRP4Q96MN2 994 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 MTMR9Q96QG7 549 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 SH2D3AQ9BRG2 576 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CSRNP2Q9H175 543 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 DNAJC25Q9H1X3 360 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 DDX25Q9UHL0 483 aaKnown RBP7.05□□□□□ -1.28
CLDN4-205ENST00000476494 HPSEQ9Y251 543 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 MAN2B2Q9Y2E5 1009 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 PAXBP1Q9Y5B6 917 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
CLDN4-205ENST00000476494 F8P00451 2351 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 PCNX1Q96RV3 2341 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 K7EQS6 105 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 PRRG1O14668 218 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms