RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	YTHDC2	Q9H6S0	1430 aa	Known RBP	6.13	□□□□□ -1.43
PRKD3-208	ENST00000475912	OVOS2	A0A0G2JMS6	1433 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	OVOS2	A0A0J9YW53	1432 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	AGFG2	O95081	481 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	PCNT	O95613	3336 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	CD1A	P06126	327 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	TYRP1	P17643	537 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	CCND1	P24385	295 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	MPP3	Q13368	585 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	FLYWCH1	Q4VC44	716 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	UTP14C	Q5TAP6	766 aa	Known RBP	6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	OVOS2	Q6IE36	1432 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	GADL1	Q6ZQY3	521 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	FUBP1	Q96AE4	644 aa	Known RBP	6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	DMRTA2	Q96SC8	542 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	TLR10	Q9BXR5	811 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	PACSIN1	Q9BY11	444 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	SLC13A1	Q9BZW2	595 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	SYNPO2L	Q9H987	977 aa		6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	UNKL	Q9H9P5	680 aa	Known RBP	6.12	□□□□□ -1.43
PRKD3-208	ENST00000475912	PIK3C2G	O75747	1445 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	ANKAR	Q7Z5J8	1434 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	ATP10D	Q9P241	1426 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	MAST3	O60307	1309 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	KIAA0355	O15063	1070 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	ESRRB	O95718	433 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	VAV2	P52735	878 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	ADK	P55263	362 aa	Known RBP	6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	TLE1	Q04724	770 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	RAB39A	Q14964	217 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	SLC15A2	Q16348	729 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	PPP4R3A	Q6IN85	833 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	TCP11L2	Q8N4U5	519 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	IL17RD	Q8NFM7	739 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	RIOX1	Q9H6W3	641 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	CASS4	Q9NQ75	786 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	TBCCD1	Q9NVR7	557 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	CDYL	Q9Y232	598 aa		6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	PARP4	Q9UKK3	1724 aa	Known RBP	6.11	□□□□□ -1.43
PRKD3-208	ENST00000475912	PHRF1	Q9P1Y6	1649 aa	Known RBP	6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	ATP7B	P35670	1465 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	GPRASP1	Q5JY77	1395 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	SALL3	Q9BXA9	1300 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	PPFIA2	O75334	1257 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	MPL	P40238	635 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	TXNRD1	Q16881	649 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	ZCRB1	Q8TBF4	217 aa	Known RBP	6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	NSUN6	Q8TEA1	469 aa	Known RBP	6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	PTCD3	Q96EY7	689 aa	Known RBP	6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	MED15	Q96RN5	788 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	HOMER2	Q9NSB8	354 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	STK32B	Q9NY57	414 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	JKAMP	Q9P055	326 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	CALCOCO1	Q9P1Z2	691 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	SLC45A2	Q9UMX9	530 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	LMO7	Q8WWI1	1683 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	LRRC37A3	O60309	1634 aa		6.1	□□□□□ -1.43
PRKD3-208	ENST00000475912	ZAR1L	A6NP61	321 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	SLC43A1	O75387	559 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	CLK3	P49761	638 aa	Known RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	DSC2	Q02487	901 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	PTPRO	Q16827	1216 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	KHDC1	Q4VXA5	237 aa	Known RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	BRDT	Q58F21	947 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912		Q6ZNX1	250 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	ZNF365	Q70YC5	407 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	COLGALT2	Q8IYK4	626 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912		Q8NA96	180 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	KLHL32	Q96NJ5	620 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	PRAM1	Q96QH2	718 aa		6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	VRK1	Q99986	396 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	VSX1	Q9NZR4	365 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	CFAP20	Q9Y6A4	193 aa	Known RBP	6.09	□□□□□ -1.43
PRKD3-208	ENST00000475912	ADCY9	O60503	1353 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	DHX57	Q6P158	1386 aa	Known RBP	6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	PAPPA	Q13219	1627 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	ANKRD62	A6NC57	917 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	MYADML2	A6NDP7	307 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	RPLP2	P05387	115 aa	Known RBP	6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	CXCR5	P32302	372 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	TTC7B	Q86TV6	843 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	MIER2	Q8N344	545 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	DNAJC5G	Q8N7S2	189 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	TMIE	Q8NEW7	156 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	SSH3	Q8TE77	659 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	TMEM125	Q96AQ2	219 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	GPATCH3	Q96I76	525 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	AIFM2	Q9BRQ8	373 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	THRAP3	Q9Y2W1	955 aa	Known RBP	6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	SPEF1	Q9Y4P9	236 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	SBF2	Q86WG5	1849 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	COL5A2	P05997	1499 aa	Predicted RBP	6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	SPATA31E1	Q6ZUB1	1445 aa		6.08	□□□□□ -1.44
PRKD3-208	ENST00000475912	TRGV11	A0A075B6L2	103 aa		6.07	□□□□□ -1.44
PRKD3-208	ENST00000475912	LRRC14B	A6NHZ5	514 aa		6.07	□□□□□ -1.44
PRKD3-208	ENST00000475912	SNUPN	O95149	360 aa	Known RBP	6.07	□□□□□ -1.44
PRKD3-208	ENST00000475912	MAL	P21145	153 aa		6.07	□□□□□ -1.44
PRKD3-208	ENST00000475912	RECQL	P46063	649 aa	Predicted RBP	6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms