RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MCRS1Q96EZ8 462 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 ZDHHC18Q9NUE0 388 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 PIN4Q9Y237 131 aaKnown RBP22.98■■□□□ 1.27
CCM2-206ENST00000474617 GPD2P43304 727 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 NDST1P52848 882 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 CDH8P55286 799 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 NFX1Q12986 1120 aaKnown RBP22.98■■□□□ 1.27
CCM2-206ENST00000474617 PDCLQ13371 301 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 PPP1R7Q15435 360 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 TTC27Q6P3X3 843 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 ZDHHC17Q8IUH5 632 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 TRIM51Q9BSJ1 452 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 DCLK3Q9C098 648 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 FAM204AQ9H8W3 233 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 CYLDQ9NQC7 956 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 GINS2Q9Y248 185 aa22.98■■□□□ 1.27
CCM2-206ENST00000474617 FAM170AA1A519 330 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 HMGB1P1B2RPK0 211 aaPredicted RBP22.97■■□□□ 1.27
CCM2-206ENST00000474617 M0QYV0 167 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 TREHO43280 583 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 RECQL4O94761 1208 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 CYBAP13498 195 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 ITIH2P19823 946 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 HSD17B3P37058 310 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 SSR1P43307 286 aaKnown RBP22.97■■□□□ 1.27
CCM2-206ENST00000474617 RPL7AP62424 266 aaKnown RBP22.97■■□□□ 1.27
CCM2-206ENST00000474617 PTK6Q13882 451 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 C2CD6Q53TS8 623 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 XYLT1Q86Y38 959 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 ZDHHC14Q8IZN3 488 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 DPH5Q9H2P9 285 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 CHST12Q9NRB3 414 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 GDAP2Q9NXN4 497 aa22.97■■□□□ 1.27
CCM2-206ENST00000474617 ECM2O94769 699 aaPredicted RBP22.96■■□□□ 1.27
CCM2-206ENST00000474617 RALAP11233 206 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 PSMA2P25787 234 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 TAS2R40P59535 323 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 TMEM62Q0P6H9 643 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 TRADDQ15628 312 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 C9orf57Q5W0N0 161 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 ARHGAP17Q68EM7 881 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 DPH6Q7L8W6 267 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 DDX42Q86XP3 938 aaKnown RBP eCLIP22.96■■□□□ 1.27
CCM2-206ENST00000474617 CPNE8Q86YQ8 564 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 CCDC89Q8N998 374 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 EIF2AQ9BY44 585 aaKnown RBP22.96■■□□□ 1.27
CCM2-206ENST00000474617 TXLNGYQ9BZA5 131 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 FOXP3Q9BZS1 431 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.96■■□□□ 1.27
CCM2-206ENST00000474617 USTQ9Y2C2 406 aa22.96■■□□□ 1.27
CCM2-206ENST00000474617 FGFR4P22455 802 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 PCK1P35558 622 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 SCNN1AP37088 669 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 DHX9Q08211 1270 aaKnown RBP22.95■■□□□ 1.26
CCM2-206ENST00000474617 SV2CQ496J9 727 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 TFDP3Q5H9I0 405 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 FBXO47Q5MNV8 452 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 EMC10Q5UCC4 262 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 SESTD1Q86VW0 696 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 TTC13Q8NBP0 860 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 ART4Q93070 314 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 SLITRK1Q96PX8 696 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 TWNKQ96RR1 684 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 CDHR5Q9HBB8 845 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 ASNSD1Q9NWL6 643 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 GRHL1Q9NZI5 618 aa22.95■■□□□ 1.26
CCM2-206ENST00000474617 PDCD11Q14690 1871 aaKnown RBP22.95■■□□□ 1.26
CCM2-206ENST00000474617 PIRO00625 290 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 RNF8O76064 485 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 KRT1P04264 644 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 MRPS6P82932 125 aaKnown RBP22.94■■□□□ 1.26
CCM2-206ENST00000474617 LLGL2Q6P1M3 1020 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 PHLDB2Q86SQ0 1253 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 PIK3R5Q8WYR1 880 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 CPXM1Q96SM3 734 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 PLEKHA4Q9H4M7 779 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 SLC38A7Q9NVC3 462 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 HESX1Q9UBX0 185 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 GTF2IRD1Q9UHL9 959 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 PLAAQ9Y263 795 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 TRPV2Q9Y5S1 764 aa22.94■■□□□ 1.26
CCM2-206ENST00000474617 TCRBV7S2A1N4TA0A589 114 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 SEPT4O43236 478 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 NUDT17P0C025 328 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 C6orf222P0C671 652 aaPredicted RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 MYZAPP0CAP1 466 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 RARBP10826 455 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 SSTR3P32745 418 aaPredicted RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 BEX3Q00994 111 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 ZNF252P-AS1Q0IIN9 211 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 ZNF771Q7L3S4 317 aaPredicted RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 SNF8Q96H20 258 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 ZMAT2Q96NC0 199 aaKnown RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 NEUROG2Q9H2A3 272 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 PABPC3Q9H361 631 aaKnown RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 NXF3Q9H4D5 531 aaKnown RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 DRG1Q9Y295 367 aaKnown RBP22.93■■□□□ 1.26
CCM2-206ENST00000474617 SNX24Q9Y343 169 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 SNX9Q9Y5X1 595 aa22.93■■□□□ 1.26
CCM2-206ENST00000474617 CASP8AP2Q9UKL3 1982 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms