RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 PRR33A8MZF0 331 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 HCRTO43612 131 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 ATP2C2O75185 946 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TACC1O75410 805 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 VNN1O95497 513 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 FGF19O95750 216 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 HLA-DRAP01903 254 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 CEBPBP17676 345 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 ENPEPQ07075 957 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-203ENST00000474047 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 NPAS3Q8IXF0 933 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 NELFBQ8WX92 580 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 TCEAL4Q96EI5 215 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 ABCB6Q9NP58 842 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 KIAA1468Q9P260 1216 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 FBXL21Q9UKT6 434 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
VAMP4-203ENST00000474047 MYBPHLA2RUH7 354 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
VAMP4-203ENST00000474047 MICAL2O94851 1124 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 TRIM21P19474 475 aaKnown RBP15.19■□□□□ 0.02
VAMP4-203ENST00000474047 CYP2F1P24903 491 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 GTF2H1P32780 548 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 PMS1P54277 932 aaKnown RBP15.19■□□□□ 0.02
VAMP4-203ENST00000474047 CCDC40Q4G0X9 1142 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 PRSS36Q5K4E3 855 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 C1orf220Q5T0J3 134 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 SCN4BQ8IWT1 228 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 SLC44A3Q8N4M1 653 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 TRIML1Q8N9V2 468 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 PSMG2Q969U7 264 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 GCNAQ96QF7 691 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 VRTNQ9H8Y1 702 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 TMEM8AQ9HCN3 771 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.02
VAMP4-203ENST00000474047 ARMCX3Q9UH62 379 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-203ENST00000474047 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
VAMP4-203ENST00000474047 DOCK8Q8NF50 2099 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
VAMP4-203ENST00000474047 GJA1P17302 382 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 PPP3CAQ08209 521 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 HTR4Q13639 388 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 ARHGAP15Q53QZ3 475 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 MDH1BQ5I0G3 518 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 KRT39Q6A163 491 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 PARM1Q6UWI2 310 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 GPR152Q8TDT2 470 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 FUBP3Q96I24 572 aaKnown RBP eCLIP15.18■□□□□ 0.02
VAMP4-203ENST00000474047 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 ATXN3LQ9H3M9 355 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 SMOC2Q9H3U7 446 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 SMYD3Q9H7B4 428 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 C11orf16Q9NQ32 467 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 MAGED2Q9UNF1 606 aaPredicted RBP15.18■□□□□ 0.02
VAMP4-203ENST00000474047 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
VAMP4-203ENST00000474047 A0A1W2PRU2 124 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 ANHXE9PGG2 379 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CSH1P0DML2 217 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CSH2P0DML3 217 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 PTPN1P18031 435 aaKnown RBP15.17■□□□□ 0.02
VAMP4-203ENST00000474047 ATF6P18850 670 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 ANXA13P27216 316 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 GABRR2P28476 465 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 GRIK1P39086 918 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CCR2P41597 374 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 EPHA5P54756 1037 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CDH8P55286 799 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 STX17P56962 302 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 PAK1Q13153 545 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 DDR2Q16832 855 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 FAM171BQ6P995 826 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CLEC17AQ6ZS10 378 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 MYLPFQ96A32 169 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CEP63Q96MT8 703 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 KXD1Q9BQD3 176 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 GPR88Q9GZN0 384 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 DNAI2Q9GZS0 605 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 MFSD1Q9H3U5 465 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CRTAC1Q9NQ79 661 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 DUSP12Q9UNI6 340 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
VAMP4-203ENST00000474047 ASS1P00966 412 aaKnown RBP15.17■□□□□ 0.02
VAMP4-203ENST00000474047 BMP6P22004 513 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 MXI1P50539 228 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 TEAD2Q15562 447 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CFAP221Q4G0U5 840 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 SPOPLQ6IQ16 392 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 FILIP1Q7Z7B0 1213 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 SUGP1Q8IWZ8 645 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms