RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NLRP10Q86W26 655 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 CXorf67Q86X51 503 aaPredicted RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 MYLK4Q86YV6 388 aaPredicted RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 RIOX2Q8IUF8 465 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 FAM186BQ8IYM0 893 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 KIAA2013Q8IYS2 634 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 AGBL3Q8NEM8 1001 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 UHMK1Q8TAS1 419 aaKnown RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 SLC35G2Q8TBE7 412 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PHOSPHO1Q8TCT1 267 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 AUTS2Q8WXX7 1259 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 SEC14L1Q92503 715 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 IL17RAQ96F46 866 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 ZNF496Q96IT1 587 aaPredicted RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 SCLT1Q96NL6 688 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 GBP4Q96PP9 640 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 MYD88Q99836 296 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 MTA3Q9BTC8 594 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 ADI1Q9BV57 179 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 DBNDD1Q9H9R9 158 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 SLC28A3Q9HAS3 691 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 MYOZ2Q9NPC6 264 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 NLRC4Q9NPP4 1024 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 CHST12Q9NRB3 414 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 DDX20Q9UHI6 824 aaKnown RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 DPP7Q9UHL4 492 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 SYNPO2Q9UMS6 1093 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 USP18Q9UMW8 372 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 ATP6V0A2Q9Y487 856 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA9Q9Y5G4 932 aaKnown RBP2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA8Q9Y5G5 932 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA7Q9Y5G6 932 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA6Q9Y5G7 932 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA3Q9Y5H0 932 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGA2Q9Y5H1 932 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 B3GALT1Q9Y5Z6 326 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 RLFQ13129 1914 aa2.8□□□□□ -1.96
CALD1-216ENST00000473714 EP300Q09472 2414 aaPredicted RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 CEP250Q9BV73 2442 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 FLT4P35916 1363 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 TCRBV5S4A2TA0A5A2 114 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 CCDC189A1A4V9 331 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 GRXCR1A8MXD5 290 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 IFRD1O00458 451 aaPredicted RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 DVL2O14641 736 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PMM2O15305 246 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PRPF6O94906 941 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 PCDH8O95206 1070 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ADH4P08319 380 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 MMEP08473 750 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PDCP20941 246 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 AGXTP21549 392 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PAX3P23760 479 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 IL6STP40189 918 aaPredicted RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 AK2P54819 239 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 VCPP55072 806 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 ADKP55263 362 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 ITGA1P56199 1179 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 LGALS4P56470 323 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 MRPS9P82933 396 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 SLC6A3Q01959 620 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 STK3Q13188 491 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 IFIT5Q13325 482 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 SLC39A6Q13433 755 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 SPIDRQ14159 915 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 LONRF1Q17RB8 773 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 CCDC142Q17RM4 750 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 SKIDA1Q1XH10 827 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PGS1Q32NB8 556 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 EPHA10Q5JZY3 1008 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 MBNL2Q5VZF2 373 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 CREB3L3Q68CJ9 461 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 SLFN12LQ6IEE8 588 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ESRP1Q6NXG1 681 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 CCDC129Q6ZRS4 1044 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 MIGA2Q7L4E1 593 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 APBB1IPQ7Z5R6 666 aaPredicted RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 MRGPRGQ86SM5 289 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 DAAM2Q86T65 1068 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ZNF354CQ86Y25 554 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 NOSTRINQ8IVI9 506 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ZBTB34Q8NCN2 500 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PLEKHO2Q8TD55 490 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 CALML6Q8TD86 181 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 DLG3Q92796 817 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 EXTL1Q92935 676 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 OPTNQ96CV9 577 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 MBD6Q96DN6 1003 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 C1GALT1C1Q96EU7 318 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 RBM17Q96I25 401 aaKnown RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 FAM193BQ96PV7 902 aaPredicted RBP2.79□□□□□ -1.96
CALD1-216ENST00000473714 MYL10Q9BUA6 226 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 WNT8AQ9H1J5 351 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 CDIP1Q9H305 208 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ZMAT4Q9H898 229 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 IFT122Q9HBG6 1241 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 PLCB1Q9NQ66 1216 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 KMT5AQ9NQR1 393 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 TAGLN3Q9UI15 199 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms