RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PCDHA10Q9Y5I2 948 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 SLC4A7Q9Y6M7 1214 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 hCG_1818297A0A087WSY0 165 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SPECC1L-ADORA2AF8WAN1 911 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 GSC2O15499 205 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CSDE1O75534 798 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 PSAPP07602 524 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 LINGO3P0C6S8 592 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CD58P19256 250 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 POLD1P28340 1107 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 STIP1P31948 543 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 GJC1P36383 396 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CBLBQ13191 982 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 RCN1Q15293 331 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 DACT2Q5SW24 774 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 SCYL3Q8IZE3 742 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FAM151AQ8WW52 585 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FGD4Q96M96 766 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CGRRF1Q99675 332 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZNF184Q99676 751 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CYP26B1Q9NR63 512 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ETAA1Q9NY74 926 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 HEY2Q9UBP5 337 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 DNPEPQ9ULA0 475 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ASB3Q9Y575 518 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SNCAIPQ9Y6H5 919 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 THSD7AQ9UPZ6 1657 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ASTN2O75129 1339 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 KLHL33A6NCF5 533 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TMEM191CA6NGB0 347 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 MCF2LO15068 1137 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 WDR46O15213 610 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 DHX15O43143 795 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZNF189O75820 626 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 WEE2P0C1S8 567 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TMEM191BP0C7N4 346 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 T-ENOLP0DO92 83 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 PGM1P36871 562 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 RCN2Q14257 317 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SLC1A5Q15758 541 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TMEM63BQ5T3F8 832 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 UBAP2Q5T6F2 1119 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 TTC39BQ5VTQ0 682 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZFPM1Q8IX07 1006 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ST13P4Q8IZP2 240 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 BANPQ8N9N5 519 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FLAD1Q8NFF5 587 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SPDYE1Q8NFV5 336 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 FNIP1Q8TF40 1166 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 JADE3Q92613 823 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 C7orf26Q96N11 449 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 BCAS3Q9H6U6 928 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 NMRK1Q9NWW6 199 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 MKS1Q9NXB0 559 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 NKX1-2Q9UD57 310 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CHORDC1Q9UHD1 332 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 UBR3Q6ZT12 1888 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 A0A0G2JND7 137 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 DPPA5A6NC42 116 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 COPEO14579 308 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TRDMT1O14717 391 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CAPN9O14815 690 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 HGSO14964 777 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 TOMM70O94826 608 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CBX6O95503 412 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 PIGRP01833 764 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ASNSP08243 561 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ITGB5P18084 799 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 KCNA3P22001 575 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 MMP8P22894 467 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SP100P23497 879 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 EIF4BP23588 611 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CNTFP26441 200 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 GCAP28676 217 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 CCND2P30279 289 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ABL2P42684 1182 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SERPINB9P50453 376 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TAS2R40P59535 323 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZNF200P98182 395 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 ADCY1Q08828 1119 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 TFDP2Q14188 446 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FAM47CQ5HY64 1035 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SH2D4BQ5SQS7 431 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 C3orf62Q6ZUJ4 267 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SH3BP5LQ7L8J4 393 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ADGRG6Q86SQ4 1221 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SDCCAG8Q86SQ7 713 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CDAN1Q8IWY9 1227 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 KIRREL3Q8IZU9 778 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 NME8Q8N427 588 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ANKLE1Q8NAG6 615 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms