RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 FUBP3Q96I24 572 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 NT5C1AQ9BXI3 368 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 ABCB6Q9NP58 842 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 SIX2Q9NPC8 291 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 CRTAC1Q9NQ79 661 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 PCDHB5Q9Y5E4 795 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 BRWD1Q9NSI6 2320 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 MYBPHLA2RUH7 354 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 C8AP07357 584 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 POU2F2P09086 479 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 HNRNPA1P09651 372 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 PTPN1P18031 435 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 RFX1P22670 979 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 MFAP3P55082 362 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 PSMC1P62191 440 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 DLX2Q07687 328 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 CFAP221Q4G0U5 840 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 CYP26C1Q6V0L0 522 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 EP400NLQ6ZTU2 488 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 MYCBPAPQ8TBZ2 947 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 WHAMMQ8TF30 809 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 PGLYRP2Q96PD5 576 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 ERGIC2Q96RQ1 377 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 DPEP3Q9H4B8 488 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 CYP4F11Q9HBI6 524 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 UBE2TQ9NPD8 197 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 PLCB1Q9NQ66 1216 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 TMLHEQ9NVH6 421 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 HMGXB4Q9UGU5 601 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 DAAM1Q9Y4D1 1078 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 C2orf16Q68DN1 1984 aa20.23■□□□□ 0.83
CTDSP1-207ENST00000473420 A0A1B0GTH6 734 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 PRRG1O14668 218 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 ATP2C2O75185 946 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 SEC24AO95486 1093 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 SERPINC1P01008 464 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 UBXN1Q04323 297 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 ITIH3Q06033 890 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 DPY19L2P1Q6NXN4 242 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 SYCE2Q6PIF2 218 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 RRAGAQ7L523 313 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 SLC7A14Q8TBB6 771 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 TWNKQ96RR1 684 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 CD207Q9UJ71 328 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 INSL5Q9Y5Q6 135 aa20.22■□□□□ 0.83
CTDSP1-207ENST00000473420 ACO1P21399 889 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 KCNA5P22460 613 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 TUFMP49411 452 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 FANCCQ00597 558 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 PLD1Q13393 1074 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 LEXMQ3ZCV2 418 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 MDH1BQ5I0G3 518 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 PPM1LQ5SGD2 360 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 ACOT1Q86TX2 421 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 SPATA2LQ8IUW3 424 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 ATAD1Q8NBU5 361 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 KAT5Q92993 513 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 MYLPFQ96A32 169 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 PCED1BQ96HM7 432 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 KREMEN1Q96MU8 473 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 ELOVL4Q9GZR5 314 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 ABI2Q9NYB9 513 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 SIK3Q9Y2K2 1263 aa20.21■□□□□ 0.83
CTDSP1-207ENST00000473420 LRG1P02750 347 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 HAPLN1P10915 354 aaPredicted RBP20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 MAGEA11P43364 429 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 RAD23BP54727 409 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 DUSP4Q13115 394 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 KLHDC7AQ5VTJ3 777 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 SLC4A11Q8NBS3 891 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 SMRP1Q8NCR6 262 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 PRKD2Q9BZL6 878 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 S1PR5Q9H228 398 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 CRISPLD1Q9H336 500 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 THEGQ9P2T0 379 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 CNTN6Q9UQ52 1028 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 YIPF1Q9Y548 306 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 ATP8B3O60423 1300 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 DENND4AQ7Z401 1863 aa20.2■□□□□ 0.82
CTDSP1-207ENST00000473420 CCDC195A0A1B0GUA6 201 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 RFPL2O75678 378 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 PAEPP09466 180 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 APBA1Q02410 837 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 SYCP1Q15431 976 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 CCDC142Q17RM4 750 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 RARS2Q5T160 578 aaKnown RBP20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 GJB7Q6PEY0 223 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 VSTM1Q6UX27 236 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 SHC3Q92529 594 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 DNAJC12Q9UKB3 198 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms