RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 LRRC47Q8N1G4 583 aaKnown RBP10.65□□□□□ -0.7
APTX-216ENST00000472896 LARP4BQ92615 738 aaKnown RBP10.65□□□□□ -0.7
APTX-216ENST00000472896 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 ZNF184Q99676 751 aaPredicted RBP10.65□□□□□ -0.7
APTX-216ENST00000472896 IQCGQ9H095 443 aaKnown RBP10.65□□□□□ -0.7
APTX-216ENST00000472896 EPB41L1Q9H4G0 881 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 ACAD9Q9H845 621 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 PREBQ9HCU5 417 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 UBN1Q9NPG3 1134 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 RNF146Q9NTX7 359 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.7
APTX-216ENST00000472896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.65□□□□□ -0.71
APTX-216ENST00000472896 H0Y3Z8 333 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 SMAPO00193 183 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 ATP9BO43861 1147 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 CCDC22O60826 627 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 PSMG1O95456 288 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 LYNP07948 512 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 SUPT20HL2P0C7V6 817 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 T-ENOLP0DO92 83 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 FGFR4P22455 802 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 HADHBP55084 474 aaKnown RBP10.65□□□□□ -0.71
APTX-216ENST00000472896 CALCOCO2Q13137 446 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 GPNMBQ14956 572 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 CYP1B1Q16678 543 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 INF2Q27J81 1249 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 SLFN13Q68D06 897 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 FAM178BQ8IXR5 827 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 RNF168Q8IYW5 571 aaPredicted RBP10.65□□□□□ -0.71
APTX-216ENST00000472896 ST13P4Q8IZP2 240 aaPredicted RBP10.65□□□□□ -0.71
APTX-216ENST00000472896 GDAP1Q8TB36 358 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 RAD54LQ92698 747 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 CEP95Q96GE4 821 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 HIC2Q96JB3 615 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 CDK5RAP3Q96JB5 506 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 NT5C3AQ9H0P0 336 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 GOLPH3Q9H4A6 298 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 BLOC1S4Q9NUP1 217 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 MTMR4Q9NYA4 1195 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 WHRNQ9P202 907 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 DNAJB4Q9UDY4 337 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 WDR37Q9Y2I8 494 aa10.65□□□□□ -0.71
APTX-216ENST00000472896 SMIM31A0A1B0GVY4 71 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 ENTPD5O75356 428 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 MYL3P08590 195 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 PABPC4LP0CB38 370 aaKnown RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 PIM1P11309 404 aaPredicted RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 BMP3P12645 472 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 ACTN1P12814 892 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 KRT13P13646 458 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 MUTP22033 750 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 PURAQ00577 322 aaKnown RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 CDR2Q01850 454 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 CAV1Q03135 178 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 SULT2A1Q06520 285 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 TMED1Q13445 227 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 PRPF4BQ13523 1007 aaKnown RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 RCN1Q15293 331 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 EDRF1Q3B7T1 1238 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 Q4G0T1 1027 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 KHDC1Q4VXA5 237 aaKnown RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 HS2ST1Q7LGA3 356 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 GJD3Q8N144 294 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 ARHGAP24Q8N264 748 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 UBL4BQ8N7F7 174 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.64□□□□□ -0.71
APTX-216ENST00000472896 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 GDPD5Q8WTR4 605 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 GLG1Q92896 1179 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 STMN2Q93045 179 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 HPS3Q969F9 1004 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 CCDC77Q9BR77 488 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 PHTF1Q9UMS5 762 aa10.64□□□□□ -0.71
APTX-216ENST00000472896 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.714e-13■□□□□ 9.3
APTX-216ENST00000472896 C2CD2LO14523 706 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 ADAMTS3O15072 1205 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 ASLP04424 464 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 UCHL3P15374 230 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
APTX-216ENST00000472896 SCNN1BP51168 640 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 GALCP54803 685 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 RPL26P61254 145 aaKnown RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 TCEAL1Q15170 157 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 NONOQ15233 471 aaKnown RBP eCLIP10.63□□□□□ -0.71
APTX-216ENST00000472896 LONRF1Q17RB8 773 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 TCTN1Q2MV58 587 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 DUSP28Q4G0W2 176 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 DCAF12L1Q5VU92 463 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 DPY19L2P1Q6NXN4 242 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 KLC3Q6P597 504 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 SYDE1Q6ZW31 735 aaPredicted RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 MARK2Q7KZI7 788 aaKnown RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 FRMD5Q7Z6J6 570 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms