RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FAM170AA1A519 330 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 CCDC66A2RUB6 948 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 SPTLC1O15269 473 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 HOXA2O43364 376 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 POMCP01189 267 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 ODC1P11926 461 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 CXCR5P32302 372 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 DNA2P51530 1060 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 ATN1P54259 1190 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-206ENST00000472815 GSCP56915 257 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-206ENST00000472815 MAMLD1Q13495 774 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 DENND1BQ6P3S1 775 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 CREG2Q8IUH2 290 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 PDCL2Q8N4E4 241 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 C3orf20Q8ND61 904 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 FEZF2Q8TBJ5 459 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 RABGGTAQ92696 567 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 C18orf8Q96DM3 657 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 SENP8Q96LD8 212 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 PSMB7Q99436 277 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 NAP1L3Q99457 506 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-206ENST00000472815 CARD9Q9H257 536 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 MIOSQ9NXC5 875 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 DSEQ9UL01 958 aa15.47■□□□□ 0.07
HIF3A-206ENST00000472815 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-206ENST00000472815 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 ZNF185O15231 689 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 PTP4A2Q12974 167 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.07
HIF3A-206ENST00000472815 TEX35Q5T0J7 233 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 DCUN1D2Q6PH85 259 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 ZNF572Q7Z3I7 529 aaPredicted RBP15.46■□□□□ 0.07
HIF3A-206ENST00000472815 METTL23Q86XA0 190 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 COG1Q8WTW3 980 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 KBTBD7Q8WVZ9 684 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 FAM193BQ96PV7 902 aaPredicted RBP15.46■□□□□ 0.07
HIF3A-206ENST00000472815 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 IP6K2Q9UHH9 426 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 PCDHB7Q9Y5E2 793 aa15.46■□□□□ 0.07
HIF3A-206ENST00000472815 CASTOR2A6NHX0 329 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 NBNO60934 754 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 B3GAT3O94766 335 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 COMTP21964 271 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 MAN1A1P33908 653 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 GPD2P43304 727 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 BCAT1P54687 386 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 PDCLQ13371 301 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 GOLGA7BQ2TAP0 167 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 NOMO2Q5JPE7 1267 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 DCLRE1AQ6PJP8 1040 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 RSRC2Q7L4I2 434 aaKnown RBP15.46■□□□□ 0.06
HIF3A-206ENST00000472815 WDTC1Q8N5D0 677 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.06
HIF3A-206ENST00000472815 DBF4BQ8NFT6 615 aa15.46■□□□□ 0.06
HIF3A-206ENST00000472815 TUBBP07437 444 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PDGFRBP09619 1106 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 DESP17661 470 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PCSK1P29120 753 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 GABRB2P47870 512 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PSMC1P62191 440 aaKnown RBP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 RNASELQ05823 741 aaKnown RBP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 ERCC6LQ2NKX8 1250 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PTPN20Q4JDL3 420 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PPP1R26Q5T8A7 1209 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 RTN4RL1Q86UN2 441 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 C12orf29Q8N999 325 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 B3GALNT2Q8NCR0 500 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 ACTRT1Q8TDG2 376 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 STK32AQ8WU08 396 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 CYLDQ9NQC7 956 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
HIF3A-206ENST00000472815 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-206ENST00000472815 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 GABRDO14764 452 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 CEP104O60308 925 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 PROSCO94903 275 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 CTNNA2P26232 953 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 RFC2P35250 354 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 AFF1P51825 1210 aaKnown RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 TLE2Q04725 743 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 FAAP100Q0VG06 881 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 BST2Q10589 180 aaKnown RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 PIGHQ14442 188 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 TRIM60Q495X7 471 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 SEL1L2Q5TEA6 688 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 WSCD1Q658N2 575 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 ZDHHC17Q8IUH5 632 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 ANKRD52Q8NB46 1076 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 LINC01599Q8WXQ3 324 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 FAM49BQ9NUQ9 324 aa15.44■□□□□ 0.06
HIF3A-206ENST00000472815 DDX43Q9NXZ2 648 aaKnown RBP15.44■□□□□ 0.06
HIF3A-206ENST00000472815 SIGLEC16A6NMB1 481 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 ENPP3O14638 875 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms