RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 EPHB1P54762 984 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 SOX8P57073 446 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 SATB1Q01826 763 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 EXOSC9Q06265 439 aaKnown RBP3□□□□□ -1.93
NCKAP1-203ENST00000471640 MCL1Q07820 350 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 LONRF3Q496Y0 759 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 AMOTQ4VCS5 1084 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 ICE2Q659A1 982 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 LAYNQ6UX15 382 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF788Q6ZQV5 615 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF551Q7Z340 670 aaPredicted RBP3□□□□□ -1.93
NCKAP1-203ENST00000471640 DENND1CQ8IV53 801 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 GRAMD1CQ8IYS0 662 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 FAM177A1Q8N128 213 aaPredicted RBP3□□□□□ -1.93
NCKAP1-203ENST00000471640 FAM46DQ8NEK8 389 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 KLHDC4Q8TBB5 520 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 DIS3LQ8TF46 1054 aaKnown RBP3□□□□□ -1.93
NCKAP1-203ENST00000471640 FBXO41Q8TF61 875 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 HASPINQ8TF76 798 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 RHOBTB2Q9BYZ6 727 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 MRPS18AQ9NVS2 196 aaKnown RBP3□□□□□ -1.93
NCKAP1-203ENST00000471640 SH2B3Q9UQQ2 575 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 MED16Q9Y2X0 877 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 PLEKHM1Q9Y4G2 1056 aa3□□□□□ -1.93
NCKAP1-203ENST00000471640 A0A088AWK7 358 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 SLC16A3O15427 465 aaKnown RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 AKAP10O43572 662 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 RFPL1O75677 317 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 UNC5CO95185 931 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 THP07101 528 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 GRPP07492 148 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 ELFN1P0C7U0 828 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 EBLN1P0CF75 366 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 U2AF1L5P0DN76 240 aaPredicted RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 NR2F6P10588 404 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 NDUFB7P17568 137 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 DRD4P21917 467 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 VIPR2P41587 438 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 KCNJ5P48544 419 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 PXNP49023 591 aaPredicted RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 CCT8P50990 548 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 PROK1P58294 105 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 RAB1AP62820 205 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 U2AF1Q01081 240 aaKnown RBP eCLIP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 GTF2H3Q13889 308 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 FGL2Q14314 439 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 IQCB1Q15051 598 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 TBCCQ15814 346 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 KHDC1LQ5JSQ8 128 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 VPS53Q5VIR6 699 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 KIAA1614Q5VZ46 1190 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 PAPD7Q5XG87 772 aaKnown RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 FCRLBQ6BAA4 426 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 SUMO4Q6EEV6 95 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 ANKRD16Q6P6B7 361 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 TMEM108Q6UXF1 575 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 DTX2Q86UW9 622 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 STAG1Q8WVM7 1258 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 JPH3Q8WXH2 748 aaPredicted RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 SLC46A1Q96NT5 459 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 PTDSS2Q9BVG9 487 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 CDH19Q9H159 772 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 ARHGEF3Q9NR81 526 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 SERTAD4Q9NUC0 356 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 PIH1D1Q9NWS0 290 aaKnown RBP2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF180Q9UJW8 692 aa2.99□□□□□ -1.93
NCKAP1-203ENST00000471640 DCLK1O15075 740 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 AP1G1O43747 822 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 PRKCGP05129 697 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 CYP2C9P11712 490 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 XRCC6P12956 609 aaKnown RBP eCLIP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 HDCP19113 662 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 PCSK6P29122 969 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 LRPAP1P30533 357 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ALDH9A1P49189 494 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF134P52741 427 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 WNT3P56703 355 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 FOXF2Q12947 444 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 BOP1Q14137 746 aaKnown RBP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF267Q14586 743 aaPredicted RBP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 AARS2Q5JTZ9 985 aaKnown RBP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 CEP85Q6P2H3 762 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ZNF804AQ7Z570 1209 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 WDR53Q7Z5U6 358 aaPredicted RBP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 DAAM2Q86T65 1068 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 RASAL3Q86YV0 1011 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 SRRM1Q8IYB3 904 aaKnown RBP2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 CAMKK1Q8N5S9 505 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 TBC1D5Q92609 795 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 TTYH3Q9C0H2 523 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ADAM21Q9UKJ8 722 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 PADI4Q9UM07 663 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 PCDHA6Q9UN73 950 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 ST3GAL5Q9UNP4 418 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 SHOC2Q9UQ13 582 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 PAXBP1Q9Y5B6 917 aa2.98□□□□□ -1.93
NCKAP1-203ENST00000471640 WIPF3A6NGB9 483 aa2.97□□□□□ -1.93
NCKAP1-203ENST00000471640 PPM1DO15297 605 aa2.97□□□□□ -1.93
NCKAP1-203ENST00000471640 UBXN7O94888 489 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms