RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TBC1D22BQ9NU19 505 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 BTBD3Q9Y2F9 522 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 GIT1Q9Y2X7 761 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 MYLKQ15746 1914 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 MYO16Q9Y6X6 1858 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 CEP192Q8TEP8 1941 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 WDR64B1ANS9 1081 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 K7ENP7 123 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 KLK10O43240 276 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 B4GALT5O43286 388 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 EDIL3O43854 480 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 CYP3A4P08684 503 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 ATF2P15336 505 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 AFMP43652 599 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 DNM2P50570 870 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 JAK3P52333 1124 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 TWF1Q12792 350 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 GRIK3Q13003 919 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 TUSC3Q13454 348 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 PTPRNQ16849 979 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 SKIDA1Q1XH10 827 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 INF2Q27J81 1249 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 PLA2G4FQ68DD2 849 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 INO80CQ6PI98 192 aaPredicted RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 PIK3AP1Q6ZUJ8 805 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 USP49Q70CQ1 688 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 SRGAP1Q7Z6B7 1085 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 NEK8Q86SG6 692 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 TCEAL8Q8IYN2 117 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 CNNM3Q8NE01 707 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 OLIG1Q8TAK6 271 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 SPATA20Q8TB22 786 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 E2F7Q96AV8 911 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 LENG9Q96B70 501 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 CNOT6LQ96LI5 555 aaKnown RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 AIFM3Q96NN9 605 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 NAP1L4Q99733 375 aaKnown RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 CDC6Q99741 560 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 POLR3CQ9BUI4 534 aaPredicted RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 GKN1Q9NS71 199 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 BMP2KQ9NSY1 1161 aaPredicted RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 DDX25Q9UHL0 483 aaKnown RBP6.43□□□□□ -1.38
VARS-222ENST00000470953 KCNJ14Q9UNX9 436 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 KIF3AQ9Y496 699 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 COL4A3BPQ9Y5P4 624 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 BACE2Q9Y5Z0 518 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 APCP25054 2843 aa6.43□□□□□ -1.38
VARS-222ENST00000470953 DDX11L8A8MPP1 907 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 CCNT1O60563 726 aaKnown RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 VNN2O95498 520 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 NPTXRO95502 500 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 TDP2O95551 362 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ARSAP15289 507 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 GCFC2P16383 781 aaKnown RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 ARF4P18085 180 aaPredicted RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 SFNP31947 248 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ELF1P32519 619 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 P2RY2P41231 377 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 BRCC3P46736 316 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 USP11P51784 963 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 NPEPPSP55786 919 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 PCBP4P57723 403 aaKnown RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 LAMTOR4Q0VGL1 99 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 GRIK2Q13002 908 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 RABEP1Q15276 862 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 AMHR2Q16671 573 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ME3Q16798 604 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 PLEKHG6Q3KR16 790 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 IQCEQ6IPM2 695 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 SLC8B1Q6J4K2 584 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ANO5Q75V66 913 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 GAREM2Q75VX8 874 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 MIER3Q7Z3K6 550 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 TTC30AQ86WT1 665 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 CCDC83Q8IWF9 413 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 C3orf58Q8NDZ4 430 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 C8orf76Q96K31 380 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ZNF512Q96ME7 567 aaPredicted RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 FAM83CQ9BQN1 747 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 DNAJC25Q9H1X3 360 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 UNC45AQ9H3U1 944 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 EBF3Q9H4W6 596 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 ASAH2Q9NR71 780 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.42□□□□□ -1.38
VARS-222ENST00000470953 LIMCH1Q9UPQ0 1083 aa6.42□□□□□ -1.38
VARS-222ENST00000470953 FN1P02751 2386 aaKnown RBP6.42□□□□□ -1.38
VARS-222ENST00000470953 ATRQ13535 2644 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 DPYSL4O14531 572 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 TRIM66O15016 1216 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 MSH4O15457 936 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 JAK2O60674 1132 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 AGFG2O95081 481 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 BAG4O95429 457 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms