RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TRIOBPQ9H2D6 2365 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 O00370 1275 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 FSCN2O14926 492 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 VNN2O95498 520 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 OR4Q2P0C623 313 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 PCSK1P29120 753 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 GNA15P30679 374 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 GLUD2P49448 558 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 CCZ1BP86790 482 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-209ENST00000470247 FMO1Q01740 532 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 UBE3AQ05086 875 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 CNGA2Q16280 664 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 CTXN3Q4LDR2 81 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 PKDCCQ504Y2 493 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 PPP1R26Q5T8A7 1209 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-209ENST00000470247 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 SLC8B1Q6J4K2 584 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 ZNF280DQ6N043 979 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 PALB2Q86YC2 1186 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 FUKQ8N0W3 1084 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 SLC30A5Q8TAD4 765 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 MYCBPAPQ8TBZ2 947 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 POF1BQ8WVV4 589 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 TIFAQ96CG3 184 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 HNRNPABQ99729 332 aaKnown RBP11.97□□□□□ -0.49
SREBF1-209ENST00000470247 AGPAT1Q99943 283 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 C11orf84Q9BUA3 381 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-209ENST00000470247 B3GNT5Q9BYG0 378 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 CERS4Q9HA82 394 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 GTF3C4Q9UKN8 822 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
SREBF1-209ENST00000470247 NLRC5Q86WI3 1866 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PLXNA4Q9HCM2 1894 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 OR6C75A6NL08 312 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 GOLGA6L6A8MZA4 724 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 H7C4K7 107 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 DDX3XO00571 662 aaKnown RBP eCLIP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 LPXNO60711 386 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 MMEP08473 750 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CCDC172P0C7W6 258 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CCDC130P13994 396 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CD19P15391 556 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 RPL17P18621 184 aaKnown RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 IRS1P35568 1242 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 EIF4A3P38919 411 aaKnown RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CDR1P51861 262 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CDR2Q01850 454 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 GPM6BQ13491 265 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PSMD5Q16401 504 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 SGO2Q562F6 1265 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 TAF3Q5VWG9 929 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 LCLAT1Q6UWP7 414 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 RAD9BQ6WBX8 426 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 WDTC1Q8N5D0 677 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 BAG1Q99933 345 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 NHEJ1Q9H9Q4 299 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 FAM49BQ9NUQ9 324 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 FNIP2Q9P278 1114 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 STK39Q9UEW8 545 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 PCDHGC5Q9Y5F6 944 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 IRAK3Q9Y616 596 aa11.96□□□□□ -0.49
SREBF1-209ENST00000470247 BZW2Q9Y6E2 419 aaKnown RBP11.96□□□□□ -0.49
SREBF1-209ENST00000470247 MYO9BQ13459 2157 aa11.96□□□□□ -0.5
SREBF1-209ENST00000470247 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
SREBF1-209ENST00000470247 A0A087X0T9 212 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 SOWAHDA6NJG2 315 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 HIDE1A8MVS5 230 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 CLDN5O00501 218 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 C2CD2LO14523 706 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 ZNF263O14978 683 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 THAP12O43422 761 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 MICAL2O94851 1124 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 CXCL14O95715 111 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 CYP1A1P04798 512 aaPredicted RBP11.95□□□□□ -0.5
SREBF1-209ENST00000470247 URODP06132 367 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 CNPP09543 421 aaKnown RBP11.95□□□□□ -0.5
SREBF1-209ENST00000470247 FAM228BP0C875 321 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 CDH5P33151 784 aaPredicted RBP11.95□□□□□ -0.5
SREBF1-209ENST00000470247 PDE6CP51160 858 aa11.95□□□□□ -0.5
SREBF1-209ENST00000470247 ROR1Q01973 937 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms