RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LMBRD2Q68DH5 695 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-202ENST00000470094 KIAA0895LQ68EN5 471 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 TMEM108Q6UXF1 575 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 CCDC149Q6ZUS6 474 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 SRGAP1Q7Z6B7 1085 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 C14orf80Q86SX3 495 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 IL31RAQ8NI17 732 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 TTC8Q8TAM2 541 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 TFAP2BQ92481 460 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 FAM136AQ96C01 138 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 ACTRT3Q9BYD9 372 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 ATP6V0A4Q9HBG4 840 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 PRDM11Q9NQV5 511 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 XPR1Q9UBH6 696 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 DDX20Q9UHI6 824 aaKnown RBP4.92□□□□□ -1.62
BRCA2-202ENST00000470094 L1RE1Q9UN81 338 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 FRMPD2Q68DX3 1309 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-202ENST00000470094 SALL3Q9BXA9 1300 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 ZAR1LA6NP61 321 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 BTN3A1O00481 513 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 KIAA0355O15063 1070 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 DCLK1O15075 740 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SUV39H1O43463 412 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SLC11A2P49281 568 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 HNRNPMP52272 730 aaKnown RBP eCLIP4.91□□□□□ -1.62
BRCA2-202ENST00000470094 ZNF134P52741 427 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 ARFIP2P53365 341 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-202ENST00000470094 GBX1Q14549 363 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 GRM3Q14832 879 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 PRR16Q569H4 304 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 STRIP1Q5VSL9 837 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SFRP4Q6FHJ7 346 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SWSAP1Q6NVH7 229 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 COL23A1Q86Y22 540 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SLC15A4Q8N697 577 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 DNAJC5GQ8N7S2 189 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 NELL2Q99435 816 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 DUSP26Q9BV47 211 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 ALG8Q9BVK2 526 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 AMBRA1Q9C0C7 1298 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 RIOX1Q9H6W3 641 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 KLC4Q9NSK0 619 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 OBP2AQ9NY56 170 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 FOXJ2Q9P0K8 574 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 TLK1Q9UKI8 766 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 TPCN1Q9ULQ1 816 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 SHOC2Q9UQ13 582 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 INSL6Q9Y581 213 aa4.91□□□□□ -1.62
BRCA2-202ENST00000470094 A6NNZ2 444 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 TBC1D4O60343 1298 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 ZBED1O96006 694 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 RHOP08100 348 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 CYP2C9P11712 490 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.63
BRCA2-202ENST00000470094 EN2P19622 333 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-202ENST00000470094 RARRES1P49788 294 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 MAPK10P53779 464 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 WNT3P56703 355 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 LILRA4P59901 499 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 SLC13A2Q13183 592 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 RAB32Q13637 225 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 TXNRD1Q16881 649 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 SLC44A4Q53GD3 710 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 VPS53Q5VIR6 699 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 ICE2Q659A1 982 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 APOA5Q6Q788 366 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 PEG10Q86TG7 708 aaKnown RBP4.9□□□□□ -1.63
BRCA2-202ENST00000470094 MPP5Q8N3R9 675 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 FAM109AQ8N4B1 249 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 LRTOMTQ8WZ04 291 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 FKBP10Q96AY3 582 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 SUCLG2Q96I99 432 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 PDLIM2Q96JY6 352 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 C22orf23Q9BZE7 217 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 DPH1Q9BZG8 443 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 KIAA1586Q9HCI6 787 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 PAXBP1Q9Y5B6 917 aa4.9□□□□□ -1.63
BRCA2-202ENST00000470094 A0A087WWL8 130 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 ADM5C9JUS6 153 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 MYO1FO00160 1098 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 TPP1O14773 563 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 FRS3O43559 492 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 PARNO95453 639 aaKnown RBP4.89□□□□□ -1.63
BRCA2-202ENST00000470094 HRGP04196 525 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 BRAFP15056 766 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
BRCA2-202ENST00000470094 GRIA3P42263 894 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 FAM193AP78312 1265 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 CTBP1Q13363 440 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 KIAA0753Q2KHM9 967 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 TEDDM1Q5T9Z0 273 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 ARHGAP40Q5TG30 622 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 RNF220Q5VTB9 566 aa4.89□□□□□ -1.63
BRCA2-202ENST00000470094 DARS2Q6PI48 645 aaKnown RBP4.89□□□□□ -1.63
BRCA2-202ENST00000470094 CHST15Q7LFX5 561 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-202ENST00000470094 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-202ENST00000470094 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms