RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 LTV1Q96GA3 475 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ZSCAN31Q96LW9 406 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SLC2A13Q96QE2 648 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 NELL2Q99435 816 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 AP1M1Q9BXS5 423 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 TEX101Q9BY14 249 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SH3GLB2Q9NR46 395 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 IFT80Q9P2H3 777 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 CORO2BQ9UQ03 480 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PCDHGB2Q9Y5G2 931 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SNX13Q9Y5W8 968 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 FPGT-TNNI3KV9GXZ4 949 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ZMYM3Q14202 1370 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 AREL1O15033 823 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 DHX16O60231 1041 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 DTNBO60941 627 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 C1RP00736 705 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 GASTP01350 101 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 HSP90AB1P08238 724 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 OSMP13725 252 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ELF1P32519 619 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 KRT9P35527 623 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 STT3AP46977 705 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 SRSF2Q01130 221 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 MEF2AQ02078 507 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 RESTQ13127 1097 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 MPP3Q13368 585 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 TP53BP2Q13625 1128 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 STARD3Q14849 445 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 BMT2Q1RMZ1 405 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 CCDC92Q53HC0 331 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 TOR2AQ5JU69 321 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 GPATCH4Q5T3I0 446 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ANKS6Q68DC2 871 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ITPRIPL1Q6GPH6 555 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 FRMD7Q6ZUT3 714 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 FASTKD5Q7L8L6 764 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 SYTL1Q8IYJ3 562 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 BOLLQ8N9W6 283 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ZNF527Q8NB42 609 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 TRAPPC12Q8WVT3 735 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ORAI2Q96SN7 254 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 BARD1Q99728 777 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 NUDT16L1Q9BRJ7 211 aaKnown RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 LRFN3Q9BTN0 628 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 RETREG1Q9H6L5 497 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 PRKRIP1Q9H875 184 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 PLEKHA5Q9HAU0 1116 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 KMT5AQ9NQR1 393 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 STARD7Q9NQZ5 370 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 ZNF277Q9NRM2 450 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 VPS45Q9NRW7 570 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 PRSS50Q9UI38 385 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 TUBD1Q9UJT1 453 aa5.3□□□□□ -1.56
SCFD1-205ENST00000469043 USP15Q9Y4E8 981 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-205ENST00000469043 FAM170AA1A519 330 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 ANKRD18BA2A2Z9 1011 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 LCHNA4D1U4 455 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 ALDH2P05091 517 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 EGR2P11161 476 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-205ENST00000469043 KRT20P35900 424 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 MTNR1BP49286 362 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 AGFG1P52594 562 aaKnown RBP5.29□□□□□ -1.56
SCFD1-205ENST00000469043 SPDYE7PQ495Y7 208 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 SLC45A4Q5BKX6 768 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 SWSAP1Q6NVH7 229 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 GGT6Q6P531 493 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 BTNL9Q6UXG8 535 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 GALNT5Q7Z7M9 940 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 OR14C36Q8NHC7 312 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 SLC30A5Q8TAD4 765 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 COA7Q96BR5 231 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 TTLL2Q9BWV7 592 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 TMEM120AQ9BXJ8 343 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 TLK1Q9UKI8 766 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 PADI4Q9UM07 663 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 ATP11BQ9Y2G3 1177 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 MAP3K2Q9Y2U5 619 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 TMEM98Q9Y2Y6 226 aa5.29□□□□□ -1.56
SCFD1-205ENST00000469043 INO80B-WBP1J3KQ70 363 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 ITGA10O75578 1167 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 TIPRLO75663 272 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 SPDEFO95238 335 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 TGFB3P10600 412 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 ITGAMP11215 1152 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 RPS6KB1P23443 525 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 PLA2G5P39877 138 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 MPLP40238 635 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 ARL4CP56559 192 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 GRM1Q13255 1194 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 PRKG1Q13976 671 aa5.28□□□□□ -1.56
SCFD1-205ENST00000469043 FAM102AQ5T9C2 384 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-205ENST00000469043 RFX8Q6ZV50 586 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms