RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 YY1P25490 414 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 AKT1P31749 480 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ADD2P35612 726 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 RXRGP48443 463 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 CPT1AP50416 773 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TUBP50607 506 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 BCAT1P54687 386 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ALDH18A1P54886 795 aaKnown RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 AP2B1P63010 937 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 USP10Q14694 798 aaKnown RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 RPS6KA2Q15349 733 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 INSCQ1MX18 579 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZNF568Q3ZCX4 644 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 PLA1AQ53H76 456 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 AGBL4Q5VU57 503 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 RAP1GAP2Q684P5 730 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 Q6ZUG5 572 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 USP30Q70CQ3 517 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TBC1D1Q86TI0 1168 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZSWIM9Q86XI8 627 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 PDSS2Q86YH6 399 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMTC1Q8IUR5 882 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 CMTM4Q8IZR5 234 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TCP11L2Q8N4U5 519 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 PCYOX1LQ8NBM8 494 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC35B2Q8TB61 432 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 STT3BQ8TCJ2 826 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 GRAMD1AQ96CP6 724 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 HVCN1Q96D96 273 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 LIN37Q96GY3 246 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 PHACTR3Q96KR7 559 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCNC2Q96PR1 638 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TRAPPC9Q96Q05 1148 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 BARD1Q99728 777 aaKnown RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 NDC1Q9BTX1 674 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 SGPP1Q9BX95 441 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TTYH3Q9C0H2 523 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMEM168Q9H0V1 697 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 BLOC1S4Q9NUP1 217 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 POLG2Q9UHN1 485 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ARHGAP26Q9UNA1 814 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 HS3ST4Q9Y661 456 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 ATRNL1Q5VV63 1379 aa4.26□□□□□ -1.73
HMGB1P25-201ENST00000468402 BIVM-ERCC5R4GMW8 1640 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 CDHR4A6H8M9 788 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 HOXC11O43248 304 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ANP32CO43423 234 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ANXA1P04083 346 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZNF888P0CJ79 500 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 PIM1P11309 404 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 PECAM1P16284 738 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 NPPBP16860 134 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 LIFRP42702 1097 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 PTDSS1P48651 473 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ADCY7P51828 1080 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 CLRN1P58418 232 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 NUCB1Q02818 461 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCNAB1Q14722 419 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 UBXN2BQ14CS0 331 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 MLANAQ16655 118 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZMAT1Q5H9K5 638 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 FAM26FQ5R3K3 315 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMTC4Q5T4D3 741 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 FAM160B1Q5W0V3 765 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 PLAG1Q6DJT9 500 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TANGO2Q6ICL3 276 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 USP17L6PQ6QN14 398 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 LAYNQ6UX15 382 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TTC30AQ86WT1 665 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 RASGRP3Q8IV61 690 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 CCDC28AQ8IWP9 274 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 LINC00482Q8N8I6 264 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 SPPL3Q8TCT6 385 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 SCAMP4Q969E2 229 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 C3orf49Q96BT1 292 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 EID2BQ96D98 161 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZBTB10Q96DT7 871 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 RRP36Q96EU6 259 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 FAM84AQ96KN4 292 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 GDF15Q99988 308 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 CPEB1Q9BZB8 566 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 EPB41L4BQ9H329 900 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 NSUN3Q9H649 340 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 JMJD4Q9H9V9 463 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 PLEKHA5Q9HAU0 1116 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 GPR35Q9HC97 309 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 SPON1Q9HCB6 807 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMEM8AQ9HCN3 771 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 ALG13Q9NP73 1137 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 JADE2Q9NQC1 790 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms