RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 QARSP47897 775 aaKnown RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 NFATC3Q12968 1075 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 WDR45BQ5MNZ6 344 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 IL27RAQ6UWB1 636 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 ATG14Q6ZNE5 492 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 REXO1Q8N1G1 1221 aaKnown RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 USP13Q92995 863 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 ATP2A3Q93084 1043 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 IL21RQ9HBE5 538 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 GOLGA2P5Q9HBQ8 144 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 CPNE5Q9HCH3 593 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 DUS2Q9NX74 493 aaKnown RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 GDAQ9Y2T3 454 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
VPS26A-204ENST00000467852 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-204ENST00000467852 N4BP3O15049 544 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-204ENST00000467852 IFNAR2P48551 515 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 TAF12Q16514 161 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 PTPRNQ16849 979 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 MAB21L3Q8N8X9 362 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 MTA3Q9BTC8 594 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 C6orf50Q9HD87 102 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS26A-204ENST00000467852 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.37
VPS26A-204ENST00000467852 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 A0A1B0GTW7 788 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 SGK1O00141 431 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 PODXLO00592 558 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 NDUFS2O75306 463 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 AFPP02771 609 aaKnown RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 MYF5P13349 255 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 CR2P20023 1033 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 CAPSQ13938 189 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 XKR9Q5GH70 373 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 SGMS1Q86VZ5 419 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 NOSTRINQ8IVI9 506 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 IL17RCQ8NAC3 791 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 ZNF248Q8NDW4 579 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-204ENST00000467852 FBN2P35556 2912 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
VPS26A-204ENST00000467852 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-204ENST00000467852 BRINP1O60477 761 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 ZNF217O75362 1048 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 DDX6P26196 483 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS26A-204ENST00000467852 MTF1Q14872 753 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 HLA-BQ31612 363 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 DDX12PQ92771 950 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 CRISPLD1Q9H336 500 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 SLC38A7Q9NVC3 462 aa12.75□□□□□ -0.37
VPS26A-204ENST00000467852 FNDC3AQ9Y2H6 1198 aaKnown RBP12.75□□□□□ -0.37
VPS26A-204ENST00000467852 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 PRC1O43663 620 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 VNN2O95498 520 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 P4HBP07237 508 aaKnown RBP12.74□□□□□ -0.37
VPS26A-204ENST00000467852 CDK4P11802 303 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 MAOBP27338 520 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 YWHABP31946 246 aaKnown RBP12.74□□□□□ -0.37
VPS26A-204ENST00000467852 MCM4P33991 863 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 LIFRP42702 1097 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.37
VPS26A-204ENST00000467852 TBC1D25Q3MII6 688 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 CENPPQ6IPU0 288 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 SYNE3Q6ZMZ3 975 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 ASAP3Q8TDY4 903 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
VPS26A-204ENST00000467852 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 LPIN3Q9BQK8 851 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 FZD8Q9H461 694 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
VPS26A-204ENST00000467852 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
VPS26A-204ENST00000467852 SMIM28A0A1B0GU29 152 aa12.73□□□□□ -0.37
VPS26A-204ENST00000467852 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms