RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 DDX56Q9NY93 547 aaKnown RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 KRT16P08779 473 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 EIF4BP23588 611 aaKnown RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 CDH5P33151 784 aaPredicted RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 TRPC3Q13507 836 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 DENND1BQ6P3S1 775 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ANKMY2Q8IV38 441 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 GRAMD1AQ96CP6 724 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ZWILCHQ9H900 591 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 UBN1Q9NPG3 1134 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 SHOC2Q9UQ13 582 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 AFG3L2Q9Y4W6 797 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 OGTO15294 1046 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 PRPF4O43172 522 aaKnown RBP eCLIP20.38■□□□□ 0.85
LIMS2-212ENST00000466410 EZRP15311 586 aaKnown RBP20.38■□□□□ 0.85
LIMS2-212ENST00000466410 RPA3P35244 121 aaPredicted RBP20.38■□□□□ 0.85
LIMS2-212ENST00000466410 TAP1Q03518 808 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 GRM1Q13255 1194 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 NEDD9Q14511 834 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 PTPN20Q4JDL3 420 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 KCNT1Q5JUK3 1230 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 CENPUQ71F23 418 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ARFGAP1Q8N6T3 406 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 GPATCH11Q8N954 259 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 KLRG1Q96E93 195 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 SLCO1B3Q9NPD5 702 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ARHGEF3Q9NR81 526 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 PCDHGC3Q9UN70 934 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 A0A1W2PPM1 405 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 IL1R2P27930 398 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 TCF7P36402 384 aaPredicted RBP20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ASPAP45381 313 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 EFNA5P52803 228 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 GDF10P55107 478 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ZNF699Q32M78 642 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ASRGL1Q7L266 308 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 JOSD2Q8TAC2 188 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ACTL9Q8TC94 416 aa20.38■□□□□ 0.85
LIMS2-212ENST00000466410 CPSF3Q9UKF6 684 aaKnown RBP20.38■□□□□ 0.85
LIMS2-212ENST00000466410 ABLIM1O14639 778 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 PSMA2P25787 234 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 MARK3P27448 753 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 GPX6P59796 221 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 ACVR2BQ13705 512 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 SPARCL1Q14515 664 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 EEPD1Q7L9B9 569 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 LRRC71Q8N4P6 559 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 RNF149Q8NC42 400 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 CHST13Q8NET6 341 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 SMC6Q96SB8 1091 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 XYLT2Q9H1B5 865 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 CYTH4Q9UIA0 394 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 AGTPBP1Q9UPW5 1226 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 MAGEB2O15479 319 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 PIAS1O75925 651 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 PRKCBP05771 671 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 HOXC6P09630 235 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 OSTNP61366 133 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 OTUD4Q01804 1114 aaKnown RBP20.37■□□□□ 0.85
LIMS2-212ENST00000466410 SLC25A11Q02978 314 aaKnown RBP20.37■□□□□ 0.85
LIMS2-212ENST00000466410 LAMTOR4Q0VGL1 99 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 PRKG1Q13976 671 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 SLC1A5Q15758 541 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 HIF1AQ16665 826 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 ANKRD22Q5VYY1 191 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 KIAA0319LQ8IZA0 1049 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 TAB3Q8N5C8 712 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-212ENST00000466410 ZNF668Q96K58 619 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-212ENST00000466410 PHTF1Q9UMS5 762 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 POLIQ9UNA4 740 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 L3MBTL1Q9Y468 752 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 FARP1Q9Y4F1 1045 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-212ENST00000466410 CEP83Q9Y592 693 aa20.37■□□□□ 0.85
LIMS2-212ENST00000466410 A8MUI8 341 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 LRCH4O75427 683 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 THNSL1Q8IYQ7 743 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 MYCBPQ99417 103 aaPredicted RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 NXF1Q9UBU9 619 aaKnown RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 STK38LQ9Y2H1 464 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 STARD13Q9Y3M8 1113 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CLUHO75153 1309 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CST8O60676 142 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 KRT3P12035 628 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CD19P15391 556 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CA4P22748 312 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 RAP1GAPP47736 663 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 EFTUD2Q15029 972 aaKnown RBP eCLIP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 ACCSLQ4AC99 568 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 MSS51Q4VC12 460 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 FAM160B1Q5W0V3 765 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 POLNQ7Z5Q5 900 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 CDR2LQ86X02 465 aaPredicted RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 TRIM50Q86XT4 487 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 AGAP11Q8TF27 550 aa20.36■□□□□ 0.85
LIMS2-212ENST00000466410 MAK16Q9BXY0 300 aaKnown RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 SMG5Q9UPR3 1016 aaKnown RBP20.36■□□□□ 0.85
LIMS2-212ENST00000466410 SOWAHBA6NEL2 793 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms