RNA–Protein interactions for RNA: ENST00000465960.2

CAPN13-205, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 1,215 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-205ENST00000465960 ELOVL4Q9GZR5 314 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.82
CAPN13-205ENST00000465960 EPB41L5Q9HCM4 733 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 MTMR10Q9NXD2 777 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
CAPN13-205ENST00000465960 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
CAPN13-205ENST00000465960 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 SRRDQ9UH36 339 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 PIN4Q9Y237 131 aaKnown RBP9.9□□□□□ -0.82
CAPN13-205ENST00000465960 EFR3BQ9Y2G0 817 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 UTP11Q9Y3A2 253 aaKnown RBP9.9□□□□□ -0.82
CAPN13-205ENST00000465960 SQORQ9Y6N5 450 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 CITO14578 2027 aa9.9□□□□□ -0.82
CAPN13-205ENST00000465960 KAT6AQ92794 2004 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SIGLEC16A6NMB1 481 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 TMEM110-MUSTN1A8MSY1 372 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PIRO00625 290 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 ECM2O94769 699 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PYGMP11217 842 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 ITGA4P13612 1032 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 ECHS1P30084 290 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 BMP8BP34820 402 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 HSPA9P38646 679 aaKnown RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 CETN2P41208 172 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 TNNT3P45378 269 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 FLT3LGP49771 235 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 RAB27AP51159 221 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 BEX3Q00994 111 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SLC7A5Q01650 507 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 MGAT3Q09327 533 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 KLF1Q13351 362 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PDCLQ13371 301 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PTPN20Q4JDL3 420 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 HSP90B2PQ58FF3 399 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 C9orf57Q5W0N0 161 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 DUPD1Q68J44 220 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SCARA3Q6AZY7 606 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 CCSAPQ6IQ19 270 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 DENND1BQ6P3S1 775 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 FAM228AQ86W67 206 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 ZDHHC17Q8IUH5 632 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 PCSK9Q8NBP7 692 aaKnown RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 IPO4Q8TEX9 1081 aaKnown RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 GRK7Q8WTQ7 553 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 LRRC45Q96CN5 670 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 MCRS1Q96EZ8 462 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 NCAPGQ9BPX3 1015 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 FRMD8P1Q9BZ68 369 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 NXF3Q9H4D5 531 aaKnown RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SLC38A7Q9NVC3 462 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SNTG2Q9NY99 539 aa9.89□□□□□ -0.83
CAPN13-205ENST00000465960 FEZ2Q9UHY8 353 aaPredicted RBP9.89□□□□□ -0.83
CAPN13-205ENST00000465960 SMIM28A0A1B0GU29 152 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 MYADML2A6NDP7 307 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 MICAL2O94851 1124 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 CALCAP01258 141 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ERBB2P04626 1255 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 CD19P15391 556 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 FGFR4P22455 802 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 GPD2P43304 727 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 RPL34P49207 117 aaKnown RBP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 CARSP49589 748 aaKnown RBP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 NDST1P52848 882 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 PRKCZQ05513 592 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ZNF252P-AS1Q0IIN9 211 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ZNF211Q13398 564 aaPredicted RBP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 PTPROQ16827 1216 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 SV2CQ496J9 727 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 PKDCCQ504Y2 493 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 GNASQ5JWF2 1037 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 FBXO47Q5MNV8 452 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 DRICH1Q6PGQ1 229 aaPredicted RBP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 SND1Q7KZF4 910 aaKnown RBP eCLIP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 Q7L0L9 218 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ARCQ7LC44 396 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 XYLT1Q86Y38 959 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 JAMLQ86YT9 394 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 TOP6BLQ8N6T0 577 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 GOLGA6L1Q8N7Z2 621 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 PXYLP1Q8TE99 480 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 C18orf8Q96DM3 657 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 BTBD6Q96KE9 485 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
CAPN13-205ENST00000465960 TWNKQ96RR1 684 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 SH3GL2Q99962 352 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 ERP44Q9BS26 406 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 SEZ6LQ9BYH1 1024 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 XPNPEP3Q9NQH7 507 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 HMGXB4Q9UGU5 601 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 IPPQ9Y573 584 aa9.88□□□□□ -0.83
CAPN13-205ENST00000465960 DOCK3Q8IZD9 2030 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms