RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TIMM44O43615 452 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 HDCP19113 662 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 HSPA9P38646 679 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 RHOAP61586 193 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TWF1Q12792 350 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 VSIG10LQ86VR7 867 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■□□□□ 8.2
SCAF11-205ENST00000465950 SFXN1Q9H9B4 322 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 BTBD7Q9P203 1132 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SCAF8Q9UPN6 1271 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 CRYL1Q9Y2S2 319 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SATB1Q01826 763 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CACNB2Q08289 660 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PDK1Q15118 436 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PPP6R3Q5H9R7 873 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ZNF589Q86UQ0 364 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 SNCAIPQ9Y6H5 919 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ERICH4A6NGS2 130 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 A6NNZ2 444 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 RBAK-RBAKDNI3L0D1 243 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 JAK2O60674 1132 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 TADA3O75528 432 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 GFPT2O94808 682 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 AMD1P17707 334 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.826e-7■■■□□ 14.8
SCAF11-205ENST00000465950 UGP2Q16851 508 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 RTL10Q7L3V2 364 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 RBM23Q86U06 439 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 LENG9Q96B70 501 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MSANTD3Q96H12 275 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ZNF668Q96K58 619 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 TMEM8AQ9HCN3 771 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 INTS7Q9NVH2 962 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PCDHA2Q9Y5H9 948 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ITIH6Q6UXX5 1313 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ASLP04424 464 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 HNRNPA1P09651 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ADCK2Q7Z695 626 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 EID3Q8N140 333 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ANKS4BQ8N8V4 417 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 SUN3Q8TAQ9 357 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 DENND1AQ8TEH3 1009 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 COPS7BQ9H9Q2 264 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 DNAJC17Q9NVM6 304 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 SPATA6Q9NWH7 488 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 HBS1LQ9Y450 684 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 C2orf81A6NN90 581 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 EEF2KO00418 725 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MAPK13O15264 365 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ANXA9O76027 345 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MAGEA9P43362 315 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MRPS5P82675 430 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CHPFQ8IZ52 775 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 IFNKQ9P0W0 207 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PCDHGB4Q9UN71 923 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ST3GAL5Q9UNP4 418 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 FMN2Q9NZ56 1722 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 E9PMD0 336 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PRPF4O43172 522 aaKnown RBP eCLIP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 TBC1D4O60343 1298 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ITGALP20701 1170 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 LRRC41Q15345 812 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CDO1Q16878 200 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 BEND7Q8N7W2 519 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 C18orf25Q96B23 403 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-205ENST00000465950 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.91□□□□□ -0.828e-7■■■□□ 18.7
SCAF11-205ENST00000465950 CRLS1Q9UJA2 301 aa9.91□□□□□ -0.82
SCAF11-205ENST00000465950 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 PRR23AA6NEV1 266 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 POTEMA6NI47 508 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 DFFAO00273 331 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 NVLO15381 856 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 SERPING1P05155 500 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 PDGFRBP09619 1106 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 NCKAP1LP55160 1127 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 BCAR1P56945 870 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 IRX4P78413 519 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 TRAPPC11Q7Z392 1133 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 EXD1Q8NHP7 514 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 UNC45AQ9H3U1 944 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 PKD2L2Q9NZM6 624 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 ADGRB1O14514 1584 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 NMT2O60551 498 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 INHBAP08476 426 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 CPA1P15085 419 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 SLC1A1P43005 524 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms