RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PCDHB18PQ96TA0 734 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 SYT15Q9BQS2 421 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 PCDHGC3Q9UN70 934 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 BACE2Q9Y5Z0 518 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 NLRC5Q86WI3 1866 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 A0A087X0T9 212 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 OR6C75A6NL08 312 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 ZNF263O14978 683 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 FAM228BP0C875 321 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 CTNNB1P35222 781 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 PDE6CP51160 858 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 KRT17Q04695 432 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 BMS1Q14692 1282 aaKnown RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 CCDC142Q17RM4 750 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 PKDCCQ504Y2 493 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 SGO2Q562F6 1265 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 INTS6LQ5JSJ4 861 aaKnown RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 LCLAT1Q6UWP7 414 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 ANKS3Q6ZW76 656 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 PALB2Q86YC2 1186 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 WDTC1Q8N5D0 677 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 SAMD11Q96NU1 681 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 TGS1Q96RS0 853 aaKnown RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 HNRNPABQ99729 332 aaKnown RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 OXCT2Q9BYC2 517 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 ZCWPW1Q9H0M4 648 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 TMLHEQ9NVH6 421 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 MTRRQ9UBK8 725 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-202ENST00000463060 PLXNA4Q9HCM2 1894 aa15.25■□□□□ 0.03
COL6A1-202ENST00000463060 EIF3CLB5ME19 914 aaKnown RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 H7C4K7 107 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 ARHGAP6O43182 974 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 THAP12O43422 761 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CD19P15391 556 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 DNAJB1P25685 340 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CDH5P33151 784 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CAMK1Q14012 370 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 STILQ15468 1287 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 RAB30Q15771 203 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 SLC18A3Q16572 532 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 TDRD12Q587J7 1177 aaKnown RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 TAF3Q5VWG9 929 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 SLC8B1Q6J4K2 584 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 PRSS55Q6UWB4 352 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 GLYCTKQ8IVS8 523 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 FUKQ8N0W3 1084 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 VPS52Q8N1B4 723 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CYFIP2Q96F07 1278 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CCDC42Q96M95 316 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 EIF3CQ99613 913 aaKnown RBP15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CLSTN3Q9BQT9 956 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 B3GNT5Q9BYG0 378 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 ZBP1Q9H171 429 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 RXFP1Q9HBX9 757 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
COL6A1-202ENST00000463060 ADAM12O43184 909 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 MED7O43513 233 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 NDUFA10O95299 355 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 CTSAP10619 480 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 GZMAP12544 262 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 UNGP13051 313 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 TNFAIP3P21580 790 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 GLUD2P49448 558 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 KIF11P52732 1056 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 UBE3AQ05086 875 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 CTXN3Q4LDR2 81 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 ZNF280DQ6N043 979 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 DENND1BQ6P3S1 775 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 RIN2Q8WYP3 895 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 ISCUQ9H1K1 167 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 NKX2-4Q9H2Z4 354 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 ALG13Q9NP73 1137 aaKnown RBP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 FNIP2Q9P278 1114 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 NAGPAQ9UK23 515 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 REXO2Q9Y3B8 237 aaKnown RBP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 IRAK3Q9Y616 596 aa15.23■□□□□ 0.03
COL6A1-202ENST00000463060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL6A1-202ENST00000463060 H3BNC9 293 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 MICAL2O94851 1124 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 VNN2O95498 520 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 CCDC130P13994 396 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 GPD2P43304 727 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 ERVFC1P60507 584 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms