RNA–Protein interactions for RNA: ENST00000462657.1

ANKRD28-207, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-207ENST00000462657 SUMO4Q6EEV6 95 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 ZNF782Q6ZMW2 699 aaPredicted RBP3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 ATRIPQ8WXE1 791 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 TNPO1Q92973 898 aaKnown RBP3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 NAF1Q96HR8 494 aaKnown RBP3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 SMAD5Q99717 465 aaKnown RBP3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 GTPBP4Q9BZE4 634 aaKnown RBP3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 MYH16Q9H6N6 1097 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 ARHGEF3Q9NR81 526 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 LMBRD1Q9NUN5 540 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 HESX1Q9UBX0 185 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 COL4A3BPQ9Y5P4 624 aa3.88□□□□□ -1.79
ANKRD28-207ENST00000462657 WDR91A4D1P6 747 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PLEKHD1A6NEE1 506 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 M0QYG6 137 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PPM1DO15297 605 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 SNUPNO95149 360 aaKnown RBP3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 GNAI2P04899 355 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PDHA1P08559 390 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 EBLN1P0CF75 366 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 AKAP5P24588 427 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 ZNF81P51508 661 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 IRX6P78412 446 aaPredicted RBP3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PROSER3Q2NL68 480 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PGS1Q32NB8 556 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 GORABQ5T7V8 394 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 TEDDM1Q5T9Z0 273 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 SFRP4Q6FHJ7 346 aaPredicted RBP3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 ZNF425Q6IV72 752 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 CEP85Q6P2H3 762 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 ANKRD16Q6P6B7 361 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 CATIPQ7Z7H3 387 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 EXOC8Q8IYI6 725 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 FAM46DQ8NEK8 389 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 TBC1D5Q92609 795 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 SLC29A3Q9BZD2 475 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 PNPOQ9NVS9 261 aa3.87□□□□□ -1.79
ANKRD28-207ENST00000462657 H0YIZ8 118 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 JTBO76095 146 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 FAM163BP0C2L3 166 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 HDCP19113 662 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 EXOSC9Q06265 439 aaKnown RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 EIF2B5Q13144 721 aaKnown RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 PLS1Q14651 629 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 BRDTQ58F21 947 aaPredicted RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 AARS2Q5JTZ9 985 aaKnown RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 ICE2Q659A1 982 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 TMEM108Q6UXF1 575 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 MAVSQ7Z434 540 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 VGLL2Q8N8G2 317 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 CHMP4CQ96CF2 233 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 MVB12AQ96EY5 273 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 SLC46A1Q96NT5 459 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 NUP88Q99567 741 aaPredicted RBP3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 SEMA4CQ9C0C4 833 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 DLL3Q9NYJ7 618 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 SH2B3Q9UQQ2 575 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 SSX2IPQ9Y2D8 614 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 PCDHA1Q9Y5I3 950 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 ZNF804BA4D1E1 1349 aa3.86□□□□□ -1.79
ANKRD28-207ENST00000462657 MYO1FO00160 1098 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 SLC16A3O15427 465 aaKnown RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 TLR5O60602 858 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 IL6RP08887 468 aaPredicted RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 ATXN1LP0C7T5 689 aaKnown RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 NDUFB7P17568 137 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 PPIFP30405 207 aaKnown RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 LIPAP38571 399 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 LOXL3P58215 753 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 SP2Q02086 613 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 GRM1Q13255 1194 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 EZH2Q15910 746 aaKnown RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 SLC44A4Q53GD3 710 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 ZNF66Q6ZN08 573 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 WDR53Q7Z5U6 358 aaPredicted RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 HPS3Q969F9 1004 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 HSPBAP1Q96EW2 488 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 BRINP2Q9C0B6 783 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 HOMER2Q9NSB8 354 aa3.85□□□□□ -1.79
ANKRD28-207ENST00000462657 TISP43B9A030 160 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ERC2O15083 957 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 IL33O95760 270 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ONECUT2O95948 504 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ERBB2P04626 1255 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 PRR35P0CG20 571 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ALDH9A1P49189 494 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 SOX8P57073 446 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ANAPC15P60006 121 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 SRSF7Q16629 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 LONRF3Q496Y0 759 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 HSP90AB4PQ58FF6 505 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 EPHA10Q5JZY3 1008 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 ATAT1Q5SQI0 421 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 C11orf87Q6NUJ2 197 aa3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 BRIX1Q8TDN6 353 aaKnown RBP3.84□□□□□ -1.79
ANKRD28-207ENST00000462657 SLC35A4Q96G79 324 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms