RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 EIF4BP23588 611 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 MARCKSP29966 332 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 GRM5P41594 1212 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 QARSP47897 775 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 PSMC5P62195 406 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 DNM1Q05193 864 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 ORC1Q13415 861 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 GAS6Q14393 721 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 EPHA7Q15375 998 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 TERF2Q15554 542 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 NOMO2Q5JPE7 1267 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 ATL3Q6DD88 541 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 LILRA6Q6PI73 481 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 B3GNT9Q6UX72 402 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 CACNA2D4Q7Z3S7 1137 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 KBTBD6Q86V97 674 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC60Q8IWA6 550 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 TPH2Q8IWU9 490 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SPEM1Q8N4L4 309 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 METTL13Q8N6R0 699 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 ITFG1Q8TB96 612 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 FAM3CQ92520 227 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 LPPQ93052 612 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SYAP1Q96A49 352 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 RXFP1Q9HBX9 757 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 VPS45Q9NRW7 570 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 LRWD1Q9UFC0 647 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 NOTCH4Q99466 2003 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SPTA1P02549 2419 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 KLHL33A6NCF5 533 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 NRP1O14786 923 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 SPTLC2O15270 562 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 B4GALT3O60512 393 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 C1RP00736 705 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 IL2RAP01589 272 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 TPM3P06753 285 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PLA2G2AP14555 144 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 FGFR4P22455 802 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 HOXC13P31276 330 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CASQ1P31415 396 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CCT6AP40227 531 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 MPLP40238 635 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 KRT85P78386 507 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PRKCEQ02156 737 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CYP4A11Q02928 519 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 MTA1Q13330 715 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CTTNQ14247 550 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PDIA5Q14554 519 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 NOLC1Q14978 699 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 SLC39A14Q15043 492 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PTPAQ15257 358 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 TEAD4Q15561 434 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 ZRSR1Q15695 479 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 IL17AQ16552 155 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 UGCGQ16739 394 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 C11orf91Q3C1V1 193 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF484Q5JVG2 852 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 KRT79Q5XKE5 535 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 TCEAL6Q6IPX3 200 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 GLB1LQ6UWU2 654 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 WDR5BQ86VZ2 330 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 KRT222Q8N1A0 295 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 RASSF8Q8NHQ8 419 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 ZDHHC1Q8WTX9 485 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 RSPH1Q8WYR4 309 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 TCEAL3Q969E4 200 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 DYDC2Q96IM9 177 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CDK5RAP3Q96JB5 506 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 FAM193BQ96PV7 902 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 EIF2AK1Q9BQI3 630 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 LXNQ9BS40 222 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 FUCA2Q9BTY2 467 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 EDEM2Q9BV94 578 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 ZSWIM4Q9H7M6 989 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 TUFT1Q9NNX1 390 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 NRBP2Q9NSY0 501 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 DACT1Q9NYF0 836 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 RGL1Q9NZL6 768 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 RSPH14Q9UHP6 348 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PAXBP1Q9Y5B6 917 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 PCDHGA5Q9Y5G8 931 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 RAI2Q9Y5P3 530 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 WASF2Q9Y6W5 498 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CFAP46Q8IYW2 2715 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 FREM2Q5SZK8 3169 aa6.51□□□□□ -1.37
SMARCC1-204ENST00000462198 CACNA1EQ15878 2313 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 ATG2BQ96BY7 2078 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 COL1A2P08123 1366 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 FAM221BA6H8Z2 402 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 MEIS3P2A8K0S8 358 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 PP2D1A8MPX8 630 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 PPP6R2O75170 966 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms