RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 GPR88Q9GZN0 384 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 ELOVL4Q9GZR5 314 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 XYLT2Q9H1B5 865 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 ZWILCHQ9H900 591 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 GOLGA2P5Q9HBQ8 144 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 DDX43Q9NXZ2 648 aaKnown RBP4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 SMARCAL1Q9NZC9 954 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 DSEQ9UL01 958 aa4.35□□□□□ -1.71
ATP13A3-206ENST00000461660 SYNJ2BP-COX16A0A087WUM0 186 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DNM1LO00429 736 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 UPP2O95045 317 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 LCP1P13796 627 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 MMP8P22894 467 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 PAX3P23760 479 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 RAD23BP54727 409 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 AMPD2Q01433 879 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 BST2Q10589 180 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 MAPRE1Q15691 268 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 GLE1Q53GS7 698 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 NOMO2Q5JPE7 1267 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 WSCD1Q658N2 575 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SMYD5Q6GMV2 418 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 RSRC2Q7L4I2 434 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 HDXQ7Z353 690 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DEFB128Q7Z7B8 93 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 NT5DC3Q86UY8 548 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CEP57Q86XR8 500 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SCN4BQ8IWT1 228 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 TOP6BLQ8N6T0 577 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 NOA1Q8NC60 698 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 HASPINQ8TF76 798 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 GRK7Q8WTQ7 553 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 HIPK3Q9H422 1215 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 AGO3Q9H9G7 860 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ERVK-5Q9HDB9 667 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 METTL5Q9NRN9 209 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 HOMER3Q9NSC5 361 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 TMEM39AQ9NV64 488 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 COX16Q9P0S2 106 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 PCSK1NQ9UHG2 260 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SALL4Q9UJQ4 1053 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 STAP1Q9ULZ2 295 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 PLXNB2O15031 1838 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 A0A0U1RQF3 1178 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 O00370 1275 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DAPK3O43293 454 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM189A1O60320 539 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ZMYND10O75800 440 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 NEBLO76041 1014 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 STAU1O95793 577 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CHRNA1P02708 482 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CKBP12277 381 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 GPD1P21695 349 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ACAT1P24752 427 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CCL23P55773 120 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ATP11AP98196 1134 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 PDCLQ13371 301 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF268Q14587 947 aaPredicted RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 LPIN1Q14693 890 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 MAP3K21Q5TCX8 1036 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 OVOS1Q6IE37 1185 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SND1Q7KZF4 910 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CTU1Q7Z7A3 348 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 RFX6Q8HWS3 928 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SPATA2LQ8IUW3 424 aaPredicted RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 KCTD6Q8NC69 237 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 C3orf20Q8ND61 904 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 TFAP2BQ92481 460 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 RNF25Q96BH1 459 aaPredicted RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 UROC1Q96N76 676 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ZMAT2Q96NC0 199 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 MRPL45Q9BRJ2 306 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 CFHR5Q9BXR6 569 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 MRPL9Q9BYD2 267 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 BCO2Q9BYV7 579 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DDX47Q9H0S4 455 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 LHX5Q9H2C1 402 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DPH5Q9H2P9 285 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 VRTNQ9H8Y1 702 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 RBM12Q9NTZ6 932 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 EHD2Q9NZN4 543 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 STIM2Q9P246 746 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 PCDHGC3Q9UN70 934 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 TIMM13Q9Y5L4 95 aaPredicted RBP4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 SQORQ9Y6N5 450 aa4.34□□□□□ -1.71
ATP13A3-206ENST00000461660 ARL5CA6NH57 179 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 ZBBXA8MT70 800 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CES2O00748 559 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 PSTPIP1O43586 416 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 HSF2BPO75031 334 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 GRAP2O75791 330 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 AP1G2O75843 785 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 TJP3O95049 919 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 PARNO95453 639 aaKnown RBP4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 ECEL1O95672 775 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms