RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 VCANP13611 3396 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 NOTCH4Q99466 2003 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 ATP2C2O75185 946 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 GNA14O95837 355 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 MBD3O95983 291 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYL4P12829 197 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 CDH8P55286 799 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 NLRP12P59046 1061 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 NOP14P78316 857 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 SPOPLQ6IQ16 392 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 ITFG1Q8TB96 612 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 GIPC2Q8TF65 315 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 EPHX3Q9H6B9 360 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 RWDD2AQ9UIY3 292 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 DOCK8Q8NF50 2099 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
TRAPPC12-213ENST00000461577 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 ASGR2P07307 311 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 CCDC192P0DO97 292 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 LAMP2P13473 410 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 TRIM21P19474 475 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 CYP2F1P24903 491 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 MCCD1P59942 119 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 WDR44Q5JSH3 913 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 B3GALNT2Q8NCR0 500 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 FGF13Q92913 245 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 LPIN3Q9BQK8 851 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 DNAI2Q9GZS0 605 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 RAB20Q9NX57 234 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 IGSF9Q9P2J2 1179 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
TRAPPC12-213ENST00000461577 MICAL2O94851 1124 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 FGF19O95750 216 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CEBPBP17676 345 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 ATF6P18850 670 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 EPHA5P54756 1037 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 ZXDAP98168 799 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CFAP221Q4G0U5 840 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CBWD6Q4V339 395 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CBWD3Q5JTY5 395 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CBWD5Q5RIA9 395 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 MCRS1Q96EZ8 462 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 TNIP3Q96KP6 325 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 SDCBP2Q9H190 292 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 DPEP3Q9H4B8 488 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 APOBEC3GQ9HC16 384 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 NME7Q9Y5B8 376 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 NCOR1O75376 2440 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
TRAPPC12-213ENST00000461577 CSH1P0DML2 217 aa11.28□□□□□ -0.6
TRAPPC12-213ENST00000461577 CSH2P0DML3 217 aa11.28□□□□□ -0.6
TRAPPC12-213ENST00000461577 GJA1P17302 382 aa11.28□□□□□ -0.6
TRAPPC12-213ENST00000461577 BDNFP23560 247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms