RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 PIM1P11309 404 aaPredicted RBP5.41□□□□□ -1.54
UBA3-204ENST00000461522 CCT8P50990 548 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 SRSF4Q08170 494 aaKnown RBP5.41□□□□□ -1.54
UBA3-204ENST00000461522 BMPR2Q13873 1038 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 PLS1Q14651 629 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 TBCCQ15814 346 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 PLAC9Q5JTB6 97 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 CAMKK1Q8N5S9 505 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 KLHDC4Q8TBB5 520 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 NELL2Q99435 816 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 SERHLQ9NQF3 203 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 HESX1Q9UBX0 185 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 WDR97A6NE52 1622 aa5.41□□□□□ -1.54
UBA3-204ENST00000461522 KIF21AQ7Z4S6 1674 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 FGD5Q6ZNL6 1462 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 DNAJB5O75953 348 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 NXPH3O95157 252 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 JUPP14923 745 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 VCAM1P19320 739 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 NEK2P51955 445 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 ZNF134P52741 427 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 EXOSC10Q01780 885 aaKnown RBP5.4□□□□□ -1.54
UBA3-204ENST00000461522 EXOSC9Q06265 439 aaKnown RBP5.4□□□□□ -1.54
UBA3-204ENST00000461522 TEDDM1Q5T9Z0 273 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 ZNF551Q7Z340 670 aaPredicted RBP5.4□□□□□ -1.54
UBA3-204ENST00000461522 FAM46DQ8NEK8 389 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 ATRIPQ8WXE1 791 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 GPATCH3Q96I76 525 aa5.4□□□□□ -1.54
UBA3-204ENST00000461522 EEA1Q15075 1411 aa5.4□□□□□ -1.55
UBA3-204ENST00000461522 KIF27Q86VH2 1401 aa5.4□□□□□ -1.55
UBA3-204ENST00000461522 LOC105371045A0A1W2PR82 267 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 DCLK1O15075 740 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 CELA2AP08217 269 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 EBLN1P0CF75 366 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 ABCG1P45844 678 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 TFF2Q03403 129 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 ZNF618Q5T7W0 954 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 TMEM108Q6UXF1 575 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 BRIX1Q8TDN6 353 aaKnown RBP5.39□□□□□ -1.55
UBA3-204ENST00000461522 HPS3Q969F9 1004 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 SLC35A4Q96G79 324 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 SLC46A1Q96NT5 459 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 SERGEFQ9UGK8 458 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 PADI4Q9UM07 663 aa5.39□□□□□ -1.55
UBA3-204ENST00000461522 TDRD9Q8NDG6 1382 aaKnown RBP5.39□□□□□ -1.55
UBA3-204ENST00000461522 BIVM-ERCC5R4GMW8 1640 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 LINC01548A6NM66 108 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 H3BUI4 141 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 PPM1DO15297 605 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 HNRNPCP07910 306 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBA3-204ENST00000461522 PDHA1P08559 390 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 HDCP19113 662 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 KRTAP10-11P60412 298 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 LONRF3Q496Y0 759 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 ATAT1Q5SQI0 421 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 KIAA1614Q5VZ46 1190 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 PAPD7Q5XG87 772 aaKnown RBP5.38□□□□□ -1.55
UBA3-204ENST00000461522 ICE2Q659A1 982 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 SFRP4Q6FHJ7 346 aaPredicted RBP5.38□□□□□ -1.55
UBA3-204ENST00000461522 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBA3-204ENST00000461522 SEMA6DQ8NFY4 1073 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 ARHGEF3Q9NR81 526 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 NOP58Q9Y2X3 529 aaKnown RBP5.38□□□□□ -1.55
UBA3-204ENST00000461522 RAD54L2Q9Y4B4 1467 aa5.38□□□□□ -1.55
UBA3-204ENST00000461522 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 ABLIM3O94929 683 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 ALDH2P05091 517 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
UBA3-204ENST00000461522 SOX8P57073 446 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 LOXL3P58215 753 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 SLC10A2Q12908 348 aaPredicted RBP5.37□□□□□ -1.55
UBA3-204ENST00000461522 EIF2B5Q13144 721 aaKnown RBP5.37□□□□□ -1.55
UBA3-204ENST00000461522 CCDC157Q569K6 752 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 SUMO4Q6EEV6 95 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 ANKRD16Q6P6B7 361 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 MAVSQ7Z434 540 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 C1QL2Q7Z5L3 287 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 DDB2Q92466 427 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 HOOK2Q96ED9 719 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 MAP3K14Q99558 947 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 C1QTNF7Q9BXJ2 289 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 SLC12A5Q9H2X9 1139 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 FLRT1Q9NZU1 646 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 ANKRD6Q9Y2G4 727 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 GRIN2BQ13224 1484 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 GAPVD1Q14C86 1478 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 SYNJ1O43426 1573 aa5.37□□□□□ -1.55
UBA3-204ENST00000461522 TARBP1Q13395 1621 aaKnown RBP5.37□□□□□ -1.55
UBA3-204ENST00000461522 ZNF213O14771 459 aa5.36□□□□□ -1.55
UBA3-204ENST00000461522 SLC16A3O15427 465 aaKnown RBP5.36□□□□□ -1.55
UBA3-204ENST00000461522 TLR5O60602 858 aa5.36□□□□□ -1.55
UBA3-204ENST00000461522 UNC5CO95185 931 aa5.36□□□□□ -1.55
UBA3-204ENST00000461522 HMGB1P09429 215 aaKnown RBP5.36□□□□□ -1.55
UBA3-204ENST00000461522 PF4V1P10720 104 aa5.36□□□□□ -1.55
UBA3-204ENST00000461522 NDUFB7P17568 137 aa5.36□□□□□ -1.55
UBA3-204ENST00000461522 PPIFP30405 207 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms