RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 EDAQ92838 391 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 ATOH1Q92858 354 aaPredicted RBP15.36■□□□□ 0.05
COL5A3-202ENST00000461214 ELMO3Q96BJ8 720 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 TNIP3Q96KP6 325 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 SPAG5Q96R06 1193 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 STK33Q9BYT3 514 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
COL5A3-202ENST00000461214 MRPL17Q9NRX2 175 aaKnown RBP15.36■□□□□ 0.05
COL5A3-202ENST00000461214 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 BACE2Q9Y5Z0 518 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 IRAK3Q9Y616 596 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 C2orf16Q68DN1 1984 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 CACNA1AO00555 2505 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 OR6C75A6NL08 312 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 WEE2P0C1S8 567 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 ACO1P21399 889 aaKnown RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 GPM6BQ13491 265 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 SMC1AQ14683 1233 aaKnown RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 PSMD5Q16401 504 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 CEP57Q86XR8 500 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 ZNF397Q8NF99 534 aaPredicted RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 SPPL3Q8TCT6 385 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 KAT5Q92993 513 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 PRRX2Q99811 253 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 ACBD6Q9BR61 282 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 MRPL45Q9BRJ2 306 aaKnown RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 DDX43Q9NXZ2 648 aaKnown RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 AJAP1Q9UKB5 411 aaPredicted RBP15.35■□□□□ 0.05
COL5A3-202ENST00000461214 CDH9Q9ULB4 789 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 CAPN11Q9UMQ6 739 aa15.35■□□□□ 0.05
COL5A3-202ENST00000461214 A8MXQ7 604 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 FSCN2O14926 492 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 CSPG5O95196 566 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 PAEPP09466 180 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 CD58P19256 250 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 ZNF132P52740 706 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 NDST1P52848 882 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 CDH8P55286 799 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 ZBED6P86452 979 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 DRAP1Q14919 205 aaPredicted RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 PTPN14Q15678 1187 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 MAPRE1Q15691 268 aaKnown RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 PTPN21Q16825 1174 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 CTXN3Q4LDR2 81 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 KIAA0319Q5VV43 1072 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 TRIM67Q6ZTA4 783 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 PPFIBP1Q86W92 1011 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 CNGA4Q8IV77 575 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 RBBP8NLQ8NC74 664 aaPredicted RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 OR6B3Q8NGW1 331 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 POF1BQ8WVV4 589 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 RIN2Q8WYP3 895 aaPredicted RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 BAP1Q92560 729 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 TCF25Q9BQ70 676 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 NT5C1AQ9BXI3 368 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 ALG13Q9NP73 1137 aaKnown RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 NGRNQ9NPE2 291 aaKnown RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 ENTPD7Q9NQZ7 604 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 FNIP2Q9P278 1114 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 IMPACTQ9P2X3 320 aa15.34■□□□□ 0.05
COL5A3-202ENST00000461214 TIMM13Q9Y5L4 95 aaPredicted RBP15.34■□□□□ 0.05
COL5A3-202ENST00000461214 HELZP42694 1942 aaKnown RBP15.33■□□□□ 0.05
COL5A3-202ENST00000461214 ANAPC1Q9H1A4 1944 aa15.33■□□□□ 0.05
COL5A3-202ENST00000461214 GRM6O15303 877 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 TBC1D4O60343 1298 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 MFAP3LO75121 409 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 SOX5P35711 763 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 GNL1P36915 607 aaPredicted RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 STAT1P42224 750 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 NDUFV1P49821 464 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 TSPY1Q01534 308 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 SMARCB1Q12824 385 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 ARID5BQ14865 1188 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 INTS6LQ5JSJ4 861 aaKnown RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 TMEM270Q6UE05 265 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 OSTM1Q86WC4 334 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 FAM71AQ8IYT1 594 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 B3GALNT2Q8NCR0 500 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 WHAMMQ8TF30 809 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 B3GALT6Q96L58 329 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 RTP3Q9BQQ7 232 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 SYT15Q9BQS2 421 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 NSUN3Q9H649 340 aaKnown RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 LUC7L2Q9Y383 392 aaKnown RBP15.33■□□□□ 0.04
COL5A3-202ENST00000461214 PCDHB4Q9Y5E5 795 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 TECTAO75443 2155 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 DENND4AQ7Z401 1863 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 ZDBF2Q9HCK1 2354 aa15.33■□□□□ 0.04
COL5A3-202ENST00000461214 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms