RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FRYQ5TBA9 3013 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 C2orf16Q68DN1 1984 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 H7C4K7 107 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 SYN3O14994 580 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 AKAP3O75969 853 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 ITGB3P05106 788 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 BMP6P22004 513 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 FSHRP23945 695 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 TARSP26639 723 aaKnown RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 RPS9P46781 194 aaKnown RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CASP4P49662 377 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 MTAPQ13126 283 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CSRP2Q16527 193 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 TCERG1LQ5VWI1 586 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 IL31Q6EBC2 164 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 RBM43Q6ZSC3 357 aaKnown RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 PALB2Q86YC2 1186 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 FAM114A1Q8IWE2 563 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 GPR65Q8IYL9 337 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 LRRC52Q8N7C0 313 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 CACNG4Q9UBN1 327 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 DSEQ9UL01 958 aa13.46□□□□□ -0.25
HDAC4-207ENST00000461113 ZFP37Q9Y6Q3 630 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-207ENST00000461113 ASPMQ8IZT6 3477 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 CEP295Q9C0D2 2601 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 C1QTNF9BB2RNN3 333 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 NCAM2O15394 837 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 PAPLNO95428 1278 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 ODC1P11926 461 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 TDGF1P13385 188 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 GTF2H1P32780 548 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 GUCY2FP51841 1108 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 NRLP54845 237 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 LILRA4P59901 499 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 DSG1Q02413 1049 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 CETN1Q12798 172 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 BFSP1Q12934 665 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-207ENST00000461113 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 TRAPPC11Q7Z392 1133 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 NELL2Q99435 816 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 SRRTQ9BXP5 876 aaKnown RBP13.45□□□□□ -0.26
HDAC4-207ENST00000461113 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-207ENST00000461113 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 IMPG2Q9BZV3 1241 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 PLEKHA4Q9H4M7 779 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 CDH7Q9ULB5 785 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
HDAC4-207ENST00000461113 ANO9A1A5B4 782 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-207ENST00000461113 SOBPA7XYQ1 873 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 PIRO00625 290 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 TGM5O43548 720 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 HUS1O60921 280 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 P4HA1P13674 534 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 ATICP31939 592 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 BRCC3P46736 316 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 PMS1P54277 932 aaKnown RBP13.44□□□□□ -0.26
HDAC4-207ENST00000461113 NTHL1P78549 312 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 PFKPQ01813 784 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 FZD5Q13467 585 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-207ENST00000461113 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 GRASPQ7Z6J2 395 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-207ENST00000461113 THEM5Q8N1Q8 247 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 C1orf127Q8N9H9 656 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 OR5B17Q8NGF7 314 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 EEF2KMTQ96G04 330 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 KXD1Q9BQD3 176 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 SPEGQ15772 3267 aa13.44□□□□□ -0.26
HDAC4-207ENST00000461113 ZZEF1O43149 2961 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 KPNA7A9QM74 516 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 F8W810 466 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 I3L4J1 428 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 CYB561D2O14569 222 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 TPM2P07951 284 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 FGFR3P22607 806 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 TNNC1P63316 161 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-207ENST00000461113 SIM2Q14190 667 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms