RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PDE1AP54750 535 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 ITKQ08881 620 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 KLF9Q13886 244 aaPredicted RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 RNF187Q5TA31 235 aaPredicted RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 GIMAP6Q6P9H5 292 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 USP37Q86T82 979 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 DDX42Q86XP3 938 aaKnown RBP eCLIP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 CBARPQ8N350 705 aaPredicted RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 LRRC71Q8N4P6 559 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 PRSS3P2Q8NHM4 247 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 FBXO41Q8TF61 875 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 TNPO1Q92973 898 aaKnown RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 ASB2Q96Q27 587 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 SMOC2Q9H3U7 446 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 DKK3Q9UBP4 350 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 CCNL1Q9UK58 526 aaPredicted RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 ATP8A1Q9Y2Q0 1164 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 TISP43B9A030 160 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 H0YIZ8 118 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 UBE2Q2LH0YL09 131 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PPM1DO15297 605 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 USP1O94782 785 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 KIF20AO95235 890 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 CHRM3P20309 590 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PXNP49023 591 aaPredicted RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TPTEP56180 551 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 LOXL3P58215 753 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 KRTAP10-9P60411 292 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TRIP6Q15654 476 aaKnown RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 ABCB5Q2M3G0 1257 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TREML2Q5T2D2 321 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TMEM108Q6UXF1 575 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TRIM72Q6ZMU5 477 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 CATSPERGQ6ZRH7 1159 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PARS2Q7L3T8 475 aaKnown RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PPP1R32Q7Z5V6 425 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 MRPL10Q7Z7H8 261 aaKnown RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 CNGA4Q8IV77 575 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 GALNT16Q8N428 558 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PNLDC1Q8NA58 520 aaKnown RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 MTMR8Q96EF0 704 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 DAZAP1Q96EP5 407 aaKnown RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 ZNF48Q96MX3 618 aaPredicted RBP3.43□□□□□ -1.86
SYPL1-203ENST00000460770 DMRTA2Q96SC8 542 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 SLC13A1Q9BZW2 595 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 PRSS22Q9GZN4 317 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 GLOD4Q9HC38 313 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TFCP2L1Q9NZI6 479 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 TRHDEQ9UKU6 1024 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 SPEF1Q9Y4P9 236 aa3.43□□□□□ -1.86
SYPL1-203ENST00000460770 CYP2D7A0A087X1C5 515 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 KCNU1A8MYU2 1149 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ALG1L2C9J202 215 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 H7C1Q1 480 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 M0QYG6 137 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 IL6RP08887 468 aaPredicted RBP3.42□□□□□ -1.86
SYPL1-203ENST00000460770 CHRM5P08912 532 aaPredicted RBP3.42□□□□□ -1.86
SYPL1-203ENST00000460770 JUPP14923 745 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 GUCY2FP51841 1108 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 DSC2Q02487 901 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 NOGQ13253 232 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 FHL1Q13642 323 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 E2F2Q14209 437 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 IQCB1Q15051 598 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 LONRF3Q496Y0 759 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 CCDC157Q569K6 752 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 VPS53Q5VIR6 699 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 MIS18BP1Q6P0N0 1132 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ZNF66Q6ZN08 573 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 HEATR3Q7Z4Q2 680 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 KRT73Q86Y46 540 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 FAM90A1Q86YD7 464 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ABHD11Q8NFV4 315 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 PIGOQ8TEQ8 1089 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 RGMAQ96B86 450 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 REPS1Q96D71 796 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 MTFMTQ96DP5 389 aaKnown RBP3.42□□□□□ -1.86
SYPL1-203ENST00000460770 SH2D3AQ9BRG2 576 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 PTDSS2Q9BVG9 487 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 VPS16Q9H269 839 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 DUSP22Q9NRW4 184 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 DLL3Q9NYJ7 618 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ELOVL5Q9NYP7 299 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ABCF2Q9UG63 623 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 ADAMTS5Q9UNA0 930 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 SHOC2Q9UQ13 582 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 PCDHA3Q9Y5H8 950 aa3.42□□□□□ -1.86
SYPL1-203ENST00000460770 POC1B-GALNT4F8VUJ3 575 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 TRIM38O00635 465 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 ZNF213O14771 459 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 INSIG1O15503 277 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 PCDHGA12O60330 932 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 FTLP02792 175 aaPredicted RBP3.41□□□□□ -1.86
SYPL1-203ENST00000460770 PRKCBP05771 671 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 SNHG28P0DPA3 235 aa3.41□□□□□ -1.86
SYPL1-203ENST00000460770 PIM1P11309 404 aaPredicted RBP3.41□□□□□ -1.86
SYPL1-203ENST00000460770 ENGP17813 658 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms