RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 GOLGA8RI6L899 631 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 FCHO1O14526 889 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 TGDSO95455 350 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 CPA2P48052 419 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 ERFP50548 548 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 ARSEP51690 589 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 SH3BGRP55822 239 aaPredicted RBP16.27■□□□□ 0.2
SSR4-206ENST00000460616 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 C6orf163Q5TEZ5 329 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 CENPUQ71F23 418 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 OXNAD1Q96HP4 312 aaPredicted RBP16.27■□□□□ 0.2
SSR4-206ENST00000460616 CBWD1Q9BRT8 395 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 ARMCX1Q9P291 453 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 SERPINB13Q9UIV8 391 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 ZNF148Q9UQR1 794 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
SSR4-206ENST00000460616 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.19
SSR4-206ENST00000460616 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.19
SSR4-206ENST00000460616 CIB2O75838 187 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 ARL4CP56559 192 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 SNAP25P60880 206 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 GPS1Q13098 491 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 EFHC2Q5JST6 749 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 SCUBE1Q8IWY4 988 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 HIC2Q96JB3 615 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 NACC1Q96RE7 527 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.19
SSR4-206ENST00000460616 TBC1D30Q9Y2I9 924 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 RPS6KL1Q9Y6S9 549 aa16.27■□□□□ 0.19
SSR4-206ENST00000460616 IMPDH2P12268 514 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 ETS1P14921 441 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 MYBPC3Q14896 1274 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 USH1GQ495M9 461 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 RIPOR1Q6ZS17 1223 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 MYLK4Q86YV6 388 aaPredicted RBP16.26■□□□□ 0.19
SSR4-206ENST00000460616 ANKMY2Q8IV38 441 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 RHOT1Q8IXI2 618 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 MCOLN2Q8IZK6 566 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 XXYLT1Q8NBI6 393 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 IDI2Q9BXS1 227 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 PHACTR1Q9C0D0 580 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 DNAJB4Q9UDY4 337 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 RABGEF1Q9UJ41 708 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 H3BRJ5 948 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 K7ENM7 598 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 OPHN1O60890 802 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 MYL2P10916 166 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 CDC16Q13042 620 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 TRMT5Q32P41 509 aaKnown RBP16.26■□□□□ 0.19
SSR4-206ENST00000460616 NME8Q8N427 588 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 ZSWIM2Q8NEG5 633 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 CYTH2Q99418 400 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 KLF6Q99612 283 aaPredicted RBP16.26■□□□□ 0.19
SSR4-206ENST00000460616 TMEM206Q9H813 350 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 DNAAF2Q9NVR5 837 aaKnown RBP16.26■□□□□ 0.19
SSR4-206ENST00000460616 KCND2Q9NZV8 630 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 DNPEPQ9ULA0 475 aa16.26■□□□□ 0.19
SSR4-206ENST00000460616 LIASO43766 372 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 PROSCO94903 275 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 PABPC4LP0CB38 370 aaKnown RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 CD58P19256 250 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 GPX6P59796 221 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 ACTR3P61158 418 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 MAP7Q14244 749 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 CPA5Q8WXQ8 436 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 ALKBH8Q96BT7 664 aaKnown RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 PANX3Q96QZ0 392 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 AVENQ9NQS1 362 aaPredicted RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 ARHGEF4Q9NR80 690 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 PSTPIP1O43586 416 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 PIAS1O75925 651 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 CALCAP01258 141 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 SPATA31D3P0C874 917 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 GJC1P36383 396 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 CCNFP41002 786 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 SCNN1BP51168 640 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 EFTUD2Q15029 972 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■■■■■ 41.9
SSR4-206ENST00000460616 PRKD1Q15139 912 aaPredicted RBP16.25■□□□□ 0.19
SSR4-206ENST00000460616 C2CD6Q53TS8 623 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 LLGL2Q6P1M3 1020 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 ADGRD1Q6QNK2 874 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 SPATA31D4Q6ZUB0 917 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■□□□□ 8.1
SSR4-206ENST00000460616 HELQQ8TDG4 1101 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms