RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ANKRD54Q6NXT1 300 aa23.98■■□□□ 1.43
C9orf3-209ENST00000460573 TATDN2Q93075 761 aa23.98■■□□□ 1.43
C9orf3-209ENST00000460573 INTS2Q9H0H0 1204 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.98■■□□□ 1.435e-17■■■■■ 409.9
C9orf3-209ENST00000460573 TAB2Q9NYJ8 693 aa23.98■■□□□ 1.43
C9orf3-209ENST00000460573 C19orf67A6NJJ6 358 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 GOLGA6L19H0YKK7 550 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 WEE2P0C1S8 567 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 OR4Q2P0C623 313 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 LMO2P25791 158 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 COPB1P53618 953 aaKnown RBP23.97■■□□□ 1.43
C9orf3-209ENST00000460573 INCA1Q0VD86 236 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 CUL2Q13617 745 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 SLC39A12Q504Y0 691 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 CES5AQ6NT32 575 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 RNF19BQ6ZMZ0 732 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 TCEAL8Q8IYN2 117 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 RPGRIP1Q96KN7 1286 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 TNIP3Q96KP6 325 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 TMEM209Q96SK2 561 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 SYT15Q9BQS2 421 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 SDCBP2Q9H190 292 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 VPS16Q9H269 839 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 SFXN1Q9H9B4 322 aa23.97■■□□□ 1.43
C9orf3-209ENST00000460573 PDGFRBP09619 1106 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 SPATA31D3P0C874 917 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 ACAT1P24752 427 aaKnown RBP23.96■■□□□ 1.43
C9orf3-209ENST00000460573 RAP1GAPP47736 663 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 GCNT1Q02742 428 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 ADCY1Q08828 1119 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 LRMPQ12912 555 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 FKBP15Q5T1M5 1219 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 SMYD5Q6GMV2 418 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 FAM171BQ6P995 826 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 SPATA31D4Q6ZUB0 917 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 LUZP1Q86V48 1076 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 SPPL2BQ8TCT7 592 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 CRACR2AQ9BSW2 395 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 ANP32EQ9BTT0 268 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 PHF7Q9BWX1 381 aaPredicted RBP23.96■■□□□ 1.43
C9orf3-209ENST00000460573 ZDHHC7Q9NXF8 308 aa23.96■■□□□ 1.43
C9orf3-209ENST00000460573 MTMR11A4FU01 709 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 HOXA9P31269 272 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 TRIM65Q6PJ69 517 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 CYP26C1Q6V0L0 522 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 LRRTM3Q86VH5 581 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 RNF135Q8IUD6 432 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 PPM1KQ8N3J5 372 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 CMASQ8NFW8 434 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-209ENST00000460573 JAKMIP2Q96AA8 810 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 PKMYT1Q99640 499 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 CYP4F11Q9HBI6 524 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 MUTYHQ9UIF7 546 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 PCDHB5Q9Y5E4 795 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 PLXNA3P51805 1871 aa23.95■■□□□ 1.42
C9orf3-209ENST00000460573 PRR33A8MZF0 331 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 CILPO75339 1184 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 ZMYND10O75800 440 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 PAPLNO95428 1278 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 C8AP07357 584 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 HNRNPA1P09651 372 aaKnown RBP eCLIP23.94■■□□□ 1.42
C9orf3-209ENST00000460573 ATP1A3P13637 1013 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 PTPN1P18031 435 aaKnown RBP23.94■■□□□ 1.42
C9orf3-209ENST00000460573 PON1P27169 355 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 NDST1P52848 882 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 ITIH3Q06033 890 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 CBX2Q14781 532 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-209ENST00000460573 C4orf50Q6ZRC1 276 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 ENOSF1Q7L5Y1 443 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 CRYBG2Q8N1P7 616 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 FUBP3Q96I24 572 aaKnown RBP eCLIP23.94■■□□□ 1.42
C9orf3-209ENST00000460573 NT5C1AQ9BXI3 368 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 RHOBTB2Q9BYZ6 727 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 ABCB6Q9NP58 842 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 CISHQ9NSE2 258 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 GTF3C4Q9UKN8 822 aa23.94■■□□□ 1.42
C9orf3-209ENST00000460573 MTCL1Q9Y4B5 1905 aaKnown RBP23.93■■□□□ 1.42
C9orf3-209ENST00000460573 PRRG1O14668 218 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 HCRTO43612 131 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 SLC9A1P19634 815 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 TUFMP49411 452 aaKnown RBP23.93■■□□□ 1.42
C9orf3-209ENST00000460573 FILIP1LQ4L180 1135 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 PPM1LQ5SGD2 360 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 SYCE2Q6PIF2 218 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 APTXQ7Z2E3 356 aaKnown RBP23.93■■□□□ 1.42
C9orf3-209ENST00000460573 B3GALNT2Q8NCR0 500 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 SLC7A14Q8TBB6 771 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 MYCBPAPQ8TBZ2 947 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 FAM122AQ96E09 287 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 PGLYRP2Q96PD5 576 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 CRTAC1Q9NQ79 661 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 APEX2Q9UBZ4 518 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 NME7Q9Y5B8 376 aa23.93■■□□□ 1.42
C9orf3-209ENST00000460573 MYBPHLA2RUH7 354 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 LGALS16A8MUM7 142 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 SEC24AO95486 1093 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 POU2F2P09086 479 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 CD58P19256 250 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 MFAP3P55082 362 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 PSMC1P62191 440 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms