RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PCDHB5Q9Y5E4 795 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 TIMM13Q9Y5L4 95 aaPredicted RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 FSCN2O14926 492 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 ADCY5O95622 1261 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 GLUD1P00367 558 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 CD19P15391 556 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 POU3F3P20264 500 aaPredicted RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 OR1D2P34982 312 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 KRT9P35527 623 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 SOX5P35711 763 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 CDH8P55286 799 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 GSDMDP57764 484 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 DRAP1Q14919 205 aaPredicted RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 MEA1Q16626 185 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 SFMBT2Q5VUG0 894 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 PLPP4Q5VZY2 271 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 VSTM1Q6UX27 236 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 ELMOD1Q8N336 334 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 MSANTD4Q8NCY6 345 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 SHC3Q92529 594 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 MRPL45Q9BRJ2 306 aaKnown RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 MIS12Q9H081 205 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 CAPN11Q9UMQ6 739 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 CNTN6Q9UQ52 1028 aa11.72□□□□□ -0.53
SMNDC1-203ENST00000460483 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 F8VZ95 297 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 F8W810 466 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 PRRG1O14668 218 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 TRIM66O15016 1216 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 TEX28O15482 410 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 LILRB3O75022 631 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 LRRN2O75325 713 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 CNPP09543 421 aaKnown RBP11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ATF2P15336 505 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ANXA13P27216 316 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 GNA15P30679 374 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 PBX1P40424 430 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ALDH1A3P47895 512 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ARPP19P56211 112 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ERVFC1P60507 584 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 VEPH1Q14D04 833 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 CFAP221Q4G0U5 840 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 TAS1R1Q7RTX1 841 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 FAM71AQ8IYT1 594 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 OR8K1Q8NGG5 319 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 GDPD5Q8WTR4 605 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 KBTBD7Q8WVZ9 684 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 CASP10Q92851 521 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 FAM84AQ96KN4 292 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 KLHL5Q96PQ7 755 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 MED10Q9BTT4 135 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 SIX2Q9NPC8 291 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 DZANK1Q9NVP4 752 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 FHOD1Q9Y613 1164 aa11.71□□□□□ -0.53
SMNDC1-203ENST00000460483 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 AKR1B15C9JRZ8 316 aaPredicted RBP11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 TBC1D4O60343 1298 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM200BP0CF97 657 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 IGFBP4P22692 258 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 MAGEA11P43364 429 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 ROR1Q01973 937 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 CNGA2Q16280 664 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 TAF12Q16514 161 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 ASIC2Q16515 512 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM171BQ6P995 826 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 PRSS55Q6UWB4 352 aaPredicted RBP11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 TRIM72Q6ZMU5 477 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 TMC6Q7Z403 805 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 ITIH5Q86UX2 942 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 SMARCD1Q96GM5 515 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 HNRNPABQ99729 332 aaKnown RBP11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 CLSTN3Q9BQT9 956 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 GANQ9H2C0 597 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 PRDM12Q9H4Q4 367 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 LUC7LQ9NQ29 371 aaKnown RBP11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 AIPL1Q9NZN9 384 aa11.7□□□□□ -0.54
SMNDC1-203ENST00000460483 FOXN3O00409 490 aaPredicted RBP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 THAP12O43422 761 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 XYLBO75191 536 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms