RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FEZF2Q8TBJ5 459 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 ZNF512Q96ME7 567 aaPredicted RBP23.25■■□□□ 1.31
SSNA1-202ENST00000459860 SEPT5Q99719 369 aaPredicted RBP23.25■■□□□ 1.31
SSNA1-202ENST00000459860 MRPL45Q9BRJ2 306 aaKnown RBP23.25■■□□□ 1.31
SSNA1-202ENST00000459860 A8MXQ7 604 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 N4BP1O75113 896 aaKnown RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 PTPN2P17706 415 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 TRIM21P19474 475 aaKnown RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 FSHRP23945 695 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 GBP2P32456 591 aaPredicted RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 NOP14P78316 857 aaKnown RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 PTPN21Q16825 1174 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 DPCR1Q3MIW9 517 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 PABPC1LQ4VXU2 614 aaKnown RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 C4orf50Q6ZRC1 276 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 GET4Q7L5D6 327 aaPredicted RBP23.24■■□□□ 1.31
SSNA1-202ENST00000459860 PLCD3Q8N3E9 789 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 FBXL6Q8N531 539 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 SLC35C1Q96A29 364 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 PHOX2BQ99453 314 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 SMYD3Q9H7B4 428 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 SLC27A5Q9Y2P5 690 aa23.24■■□□□ 1.31
SSNA1-202ENST00000459860 VNN2O95498 520 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 PDGFRBP09619 1106 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 PTMSP20962 102 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 CETN1Q12798 172 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 VEPH1Q14D04 833 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 WDR44Q5JSH3 913 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 SASS6Q6UVJ0 657 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 LRRTM3Q86VH5 581 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 SPATA2LQ8IUW3 424 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-202ENST00000459860 PI4K2AQ9BTU6 479 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 RAB20Q9NX57 234 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 GTF3C4Q9UKN8 822 aa23.23■■□□□ 1.31
SSNA1-202ENST00000459860 C2CD4DB7Z1M9 353 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 ERCC5P28715 1186 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 PSMC1P62191 440 aaKnown RBP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 TCF15Q12870 199 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 CT47A1Q5JQC4 288 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 SPOPLQ6IQ16 392 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 RBM43Q6ZSC3 357 aaKnown RBP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 ITIH5Q86UX2 942 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 FAM200AQ8TCP9 573 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 CORO1BQ9BR76 489 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 DNAI2Q9GZS0 605 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 NIF3L1Q9GZT8 377 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 CRISPLD1Q9H336 500 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 ABCB6Q9NP58 842 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.22■■□□□ 1.311e-18■■■■■ 161.5
SSNA1-202ENST00000459860 ASAH2Q9NR71 780 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 HCFC1R1Q9NWW0 138 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 DNMT3BQ9UBC3 853 aaKnown RBP23.22■■□□□ 1.31
SSNA1-202ENST00000459860 ASB3Q9Y575 518 aa23.22■■□□□ 1.31
SSNA1-202ENST00000459860 HCRTO43612 131 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 LMO2P25791 158 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 RAP1GAPP47736 663 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 MARSP56192 900 aaKnown RBP23.21■■□□□ 1.31
SSNA1-202ENST00000459860 NTHL1P78549 312 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 CBWD6Q4V339 395 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 CBWD3Q5JTY5 395 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 CBWD5Q5RIA9 395 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 CYP4A22Q5TCH4 519 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 PDZD4Q76G19 769 aaPredicted RBP23.21■■□□□ 1.31
SSNA1-202ENST00000459860 TTC9BQ8N6N2 239 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 LEMD2Q8NC56 503 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 ELMO3Q96BJ8 720 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 FUBP3Q96I24 572 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSNA1-202ENST00000459860 TMLHEQ9NVH6 421 aa23.21■■□□□ 1.31
SSNA1-202ENST00000459860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSNA1-202ENST00000459860 MYBPHLA2RUH7 354 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 ZNF197O14709 1029 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 RHOP08100 348 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 HAPLN1P10915 354 aaPredicted RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 ASPAP45381 313 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 FMO5P49326 533 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CDR1P51861 262 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 VCPP55072 806 aaKnown RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CDH8P55286 799 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CYP27A1Q02318 531 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 TAF12Q16514 161 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CREBRFQ8IUR6 639 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 FAM114A1Q8IWE2 563 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 TRIM59Q8IWR1 403 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 SUGP1Q8IWZ8 645 aaKnown RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 ZDHHC14Q8IZN3 488 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 FAXDC2Q96IV6 333 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 TNIP3Q96KP6 325 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CNOT6LQ96LI5 555 aaKnown RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 PKMYT1Q99640 499 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 CYP3A43Q9HB55 503 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 MAGEC2Q9UBF1 373 aaPredicted RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 MRPS23Q9Y3D9 190 aaKnown RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 ZFP37Q9Y6Q3 630 aaPredicted RBP23.2■■□□□ 1.3
SSNA1-202ENST00000459860 DOCK6Q96HP0 2047 aa23.2■■□□□ 1.3
SSNA1-202ENST00000459860 ATP8B3O60423 1300 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 ATP2C2O75185 946 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 SOAT2O75908 522 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 PTPN5P54829 565 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 RPL10AP62906 217 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms