RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ISCUQ9H1K1 167 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 APOBEC3GQ9HC16 384 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 IL23AQ9NPF7 189 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 TBC1D13Q9NVG8 400 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 GTF3C4Q9UKN8 822 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ADAM28Q9UKQ2 775 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PCDHB8Q9UN66 801 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 STXBP5LQ9Y2K9 1186 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 INSL6Q9Y581 213 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC4A7Q9Y6M7 1214 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 FNDC1Q4ZHG4 1894 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CCDC85CA6NKD9 419 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 OR6C75A6NL08 312 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SPDYE4A6NLX3 237 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM110-MUSTN1A8MSY1 372 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM189-UBE2V1I3L0A0 370 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 DDX3XO00571 662 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PTGESO14684 152 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 INPPL1O15357 1258 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MGEA5O60502 916 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PALMO75781 387 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FBXO21O94952 628 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MOCS3O95396 460 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 KRT3P12035 628 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CSF2RAP15509 400 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACO1P21399 889 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MCM3P25205 808 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ADORA2BP29275 332 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 GRIK1P39086 918 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 WNT7BP56706 349 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PSMC1P62191 440 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FMO1Q01740 532 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CENPCQ03188 943 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MESDQ14696 234 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACAP1Q15027 740 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PPP2R5EQ16537 467 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 GOLGA7BQ2TAP0 167 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ASTE1Q2TB18 679 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 USP41Q3LFD5 358 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CFAP221Q4G0U5 840 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTXN3Q4LDR2 81 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PAN2Q504Q3 1202 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SEL1L2Q5TEA6 688 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM171A1Q5VUB5 890 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 WSCD1Q658N2 575 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 LCLAT1Q6UWP7 414 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 NYAP1Q6ZVC0 841 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF598Q86UK7 904 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PHF13Q86YI8 300 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MAP7D3Q8IWC1 876 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CMTR2Q8IYT2 770 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 C7orf61Q8IZ16 206 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MCOLN2Q8IZK6 566 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 C17orf53Q8N3J3 647 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PDCL2Q8N4E4 241 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FIBCD1Q8N539 461 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ANKRD52Q8NB46 1076 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC30A5Q8TAD4 765 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF564Q8TBZ8 553 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 STK32AQ8WU08 396 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 C2orf15Q8WU43 125 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC20A1Q8WUM9 679 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 KAT5Q92993 513 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 TOP1MTQ969P6 601 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SMARCD1Q96GM5 515 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PBKQ96KB5 322 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC9A7Q96T83 725 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FERMT1Q9BQL6 677 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SYT15Q9BQS2 421 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 C11orf70Q9BRQ4 267 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ELOVL4Q9GZR5 314 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 THAP2Q9H0W7 228 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 GOLGA2P5Q9HBQ8 144 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 AVENQ9NQS1 362 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM49BQ9NUQ9 324 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ASNSD1Q9NWL6 643 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 SPG21Q9NZD8 308 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 ANAPC7Q9UJX3 599 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 NOCTQ9UK39 431 aaKnown RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 TSPAN16Q9UKR8 245 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 TBX21Q9UL17 535 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 MTUS1Q9ULD2 1270 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 STAP1Q9ULZ2 295 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 PRG3Q9Y2Y8 225 aaPredicted RBP6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 HYOU1Q9Y4L1 999 aa6.17□□□□□ -1.42
RNU1-88P-201ENST00000459274 KIAA0100Q14667 2235 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTAGE15A4D2H0 777 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 USP27XA6NNY8 438 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 GOLGA8SH3BPF8 625 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 M0QZQ0 153 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 NRP1O14786 923 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 TRIM66O15016 1216 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MICAL2O94851 1124 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLU7O95391 586 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CYP1A1P04798 512 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms