RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 UTP6Q9NYH9 597 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 KANSL3Q9P2N6 904 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ANKFY1Q9P2R3 1169 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 HERC5Q9UII4 1024 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 DNPEPQ9ULA0 475 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ASB3Q9Y575 518 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 UBIAD1Q9Y5Z9 338 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 SCINQ9Y6U3 715 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 KAT6AQ92794 2004 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ANK1P16157 1881 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 A0A1W2PPM1 405 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 LRRD1A4D1F6 860 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TM9SF1O15321 606 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CCDC22O60826 627 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 DNAJC6O75061 913 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ENTPD5O75356 428 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CALCAP01258 141 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ITGAVP06756 1048 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NPR1P16066 1061 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CD58P19256 250 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 PCK1P35558 622 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 VHLP40337 213 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CETN2P41208 172 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NPTX2P47972 431 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NOMO3P69849 1222 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 OCRLQ01968 901 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 OASLQ15646 514 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 MAPK6Q16659 721 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TKFCQ3LXA3 575 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 PLEKHG4Q58EX7 1191 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 LRRC38Q5VT99 294 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TRIM68Q6AZZ1 485 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 IRGCQ6NXR0 463 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CENPUQ71F23 418 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 FAM160B2Q86V87 743 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 LDHDQ86WU2 507 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 GPD1LQ8N335 351 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 MZB1Q8WU39 189 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NKD2Q969F2 451 aaPredicted RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 KCTD12Q96CX2 325 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 PTCD3Q96EY7 689 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 RBM41Q96IZ5 413 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 SLITRK1Q96PX8 696 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CADM1Q9BY67 442 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 YIPF3Q9GZM5 350 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 GPRC5CQ9NQ84 441 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 STOML1Q9UBI4 398 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 RABGEF1Q9UJ41 708 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NUMBLQ9Y6R0 609 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 COL11A1P12107 1806 aaPredicted RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 SMAPO00193 183 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ATP2A1O14983 1001 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 PLSCR1O15162 318 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TJP3O95049 919 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 IL1BP01584 269 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TROVE2P10155 538 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS50-208ENST00000458707 ACO1P21399 889 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 GARTP22102 1010 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ARSEP51690 589 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 GEMIN4P57678 1058 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 GPS1Q13098 491 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 UGCGQ16739 394 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ACBD5Q5T8D3 534 aaPredicted RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 FAM91A1Q658Y4 838 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 MTDHQ86UE4 582 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 TRIM42Q8IWZ5 723 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ABRAQ8N0Z2 381 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CXorf38Q8TB03 319 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 FEZF2Q8TBJ5 459 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ACER1Q8TDN7 264 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 ZNF516Q92618 1163 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 ALKBH8Q96BT7 664 aaKnown RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 SYT15Q9BQS2 421 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 BTBD10Q9BSF8 475 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 SLC4A5Q9BY07 1137 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 VPS11Q9H270 941 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 MMADHCQ9H3L0 296 aaPredicted RBP8.94□□□□□ -0.98
VPS50-208ENST00000458707 VPS37BQ9H9H4 285 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 C17orf75Q9HAS0 396 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TRPV5Q9NQA5 729 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 TBC1D22BQ9NU19 505 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 NMRK1Q9NWW6 199 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 COL20A1Q9P218 1284 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 IP6K2Q9UHH9 426 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 CNTN6Q9UQ52 1028 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 LRCH1Q9Y2L9 728 aa8.94□□□□□ -0.98
VPS50-208ENST00000458707 DENND3A2RUS2 1198 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 NVLO15381 856 aaKnown RBP8.93□□□□□ -0.98
VPS50-208ENST00000458707 TLR3O15455 904 aaKnown RBP8.93□□□□□ -0.98
VPS50-208ENST00000458707 GSC2O15499 205 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 TGDSO95455 350 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 KRT4P19013 534 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 TUBP50607 506 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 VCPP55072 806 aaKnown RBP8.93□□□□□ -0.98
VPS50-208ENST00000458707 GPX6P59796 221 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms