RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GPIHBP1Q8IV16 184 aa16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 DCP1BQ8IZD4 617 aaKnown RBP16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 ZNF687Q8N1G0 1237 aa16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 CSGALNACT1Q8TDX6 532 aa16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 E2F7Q96AV8 911 aa16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 ZNF334Q9HCZ1 680 aaPredicted RBP16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 NUP210Q8TEM1 1887 aaPredicted RBP16.96■□□□□ 0.31
CHCHD3-204ENST00000457942 NCANO14594 1321 aa16.96■□□□□ 0.3
CHCHD3-204ENST00000457942 HUS1O60921 280 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 PPP6R2O75170 966 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CCNE1P24864 410 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 WNT7BP56706 349 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 AMPD3Q01432 767 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 MFSD6LQ8IWD5 586 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CSGALNACT2Q8N6G5 542 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CELF5Q8N6W0 485 aaKnown RBP16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 SPPL2BQ8TCT7 592 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 GIPC2Q8TF65 315 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 C2orf15Q8WU43 125 aaKnown RBP16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 LRRC3Q9BY71 257 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CUEDC2Q9H467 287 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 HSFX1Q9UBD0 423 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CEP295Q9C0D2 2601 aa16.95■□□□□ 0.3
CHCHD3-204ENST00000457942 CUTAO60888 179 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 YEATS4O95619 227 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 ATF6P18850 670 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 CYP4F8P98187 520 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 SMARCB1Q12824 385 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 GAS6Q14393 721 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 AASDHQ4L235 1098 aaPredicted RBP16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 Q6ZS52 159 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 C1orf127Q8N9H9 656 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 IQUBQ8NA54 791 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 TTC8Q8TAM2 541 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 SNX21Q969T3 373 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 ANKRD36BP1Q96IX9 119 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 FAM84AQ96KN4 292 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 MTMR12Q9C0I1 747 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 TRPV4Q9HBA0 871 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 PDE11AQ9HCR9 933 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 ITGA11Q9UKX5 1188 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 PCDHB5Q9Y5E4 795 aa16.94■□□□□ 0.3
CHCHD3-204ENST00000457942 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 KIAA0391O15091 583 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 HRO43593 1189 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 TNNC2P02585 160 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 CDC25CP30307 473 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 SOX9P48436 509 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 KPNA1P52294 538 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 RBP5P82980 135 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 MYL7Q01449 175 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 SF3A2Q15428 464 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 IL31Q6EBC2 164 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 GAREM2Q75VX8 874 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 CEP68Q76N32 757 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 ARID3BQ8IVW6 561 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 ANGPTL2Q9UKU9 493 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
CHCHD3-204ENST00000457942 F5P12259 2224 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 PRPF40AO75400 957 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 ZSCAN22P10073 491 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 HAPLN1P10915 354 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 CXCL12P48061 93 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 ME1P48163 572 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 E2F4Q16254 413 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 CSRP2Q16527 193 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 NFE2Q16621 373 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 LRRTM3Q86VH5 581 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 LRRC52Q8N7C0 313 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 SPRYD3Q8NCJ5 442 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 RSPRY1Q96DX4 576 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 PI4K2AQ9BTU6 479 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 KBTBD4Q9NVX7 518 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 C2orf42Q9NWW7 574 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 MAGED2Q9UNF1 606 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-204ENST00000457942 ZNF233A6NK53 670 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 CHADO15335 359 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 F13A1P00488 732 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 ACAT1P24752 427 aaKnown RBP16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 SURF1Q15526 300 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 FAM26FQ5R3K3 315 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 N4BP2L1Q5TBK1 243 aaPredicted RBP16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 SHC4Q6S5L8 630 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 TMEM86AQ8N2M4 240 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 FAM160A2Q8N612 972 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms