RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 MCOLN2Q8IZK6 566 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLC35F6Q8N357 371 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TMEM199Q8N511 208 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 OR6B3Q8NGW1 331 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 STK32AQ8WU08 396 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 KBTBD7Q8WVZ9 684 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZNF592Q92610 1267 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZNF653Q96CK0 615 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 SENP8Q96LD8 212 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 HEXIM2Q96MH2 286 aaKnown RBP9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 FAM193BQ96PV7 902 aaPredicted RBP9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TMEM175Q9BSA9 504 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 PACSIN1Q9BY11 444 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 THAP2Q9H0W7 228 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 GOLGA2P5Q9HBQ8 144 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 ACP6Q9NPH0 428 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TAS2R14Q9NYV8 317 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 HESX1Q9UBX0 185 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TRIM10Q9UDY6 481 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 L1RE1Q9UN81 338 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 INPP5FQ9Y2H2 1132 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TDRD15B5MCY1 1934 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 A0A0U1RQJ8 604 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 TMCO5BA8MYB1 307 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CES2O00748 559 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 SPTLC1O15269 473 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 B3GAT3O94766 335 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 POMCP01189 267 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 TCP1P17987 556 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ABCB4P21439 1286 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CYP2C18P33260 490 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 NOP2P46087 812 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 BCAT1P54687 386 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CDH8P55286 799 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CCL23P55773 120 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLC8A3P57103 927 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ELAVL2Q12926 359 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MAPRE1Q15691 268 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CLUL1Q15846 466 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZNF394Q53GI3 561 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 SCARA3Q6AZY7 606 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MFSD5Q6N075 450 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLFN11Q7Z7L1 901 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZDHHC17Q8IUH5 632 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 COLGALT2Q8IYK4 626 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 LRRC57Q8N9N7 239 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLC35G2Q8TBE7 412 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ATRIPQ8WXE1 791 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 TFAP2BQ92481 460 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ELMO3Q96BJ8 720 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 OXCT2Q9BYC2 517 aaPredicted RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 PPP1R12CQ9BZL4 782 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MCOLN1Q9GZU1 580 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 PARVAQ9NVD7 372 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 TBC1D13Q9NVG8 400 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 ADAM22Q9P0K1 906 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CTTNBP2NLQ9P2B4 639 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 RNF14Q9UBS8 474 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CDH9Q9ULB4 789 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 DUSP10Q9Y6W6 482 aa9.45□□□□□ -0.9
CDC42EP3-204ENST00000457889 MICAL3Q7RTP6 2002 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 GRID2IPA4D2P6 1211 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 CASTOR2A6NHX0 329 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 MIF4GDA9UHW6 222 aaKnown RBP9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 M0QYV0 167 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SYN3O14994 580 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 PALMO75781 387 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 MICAL2O94851 1124 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 MOCS3O95396 460 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 AMHP03971 560 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 RAG1P15918 1043 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 MAN1A1P33908 653 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SCNN1AP37088 669 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLC1A1P43005 524 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 ACADSBP45954 432 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 WHAMMP3Q1A5X7 153 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 PLEKHA7Q6IQ23 1121 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 ERICH1Q86X53 443 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 THEM5Q8N1Q8 247 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 ANKRD52Q8NB46 1076 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 C3orf20Q8ND61 904 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 WNT2BQ93097 391 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SCLYQ96I15 445 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms