RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 CD52P31358 61 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 MLH1P40692 756 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 SLC1A1P43005 524 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
MBD1-210ENST00000457839 TTC27Q6P3X3 843 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.28■□□□□ 0.36
MBD1-210ENST00000457839 FAXDC2Q96IV6 333 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 NAP1L3Q99457 506 aaPredicted RBP17.28■□□□□ 0.36
MBD1-210ENST00000457839 DPH5Q9H2P9 285 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 PI4K2BG5E9Z4 385 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 PIRO00625 290 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 HMGCRP04035 888 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 FGFR1P11362 822 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 KCNJ1P48048 391 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 RGS7P49802 495 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 PDCLQ13371 301 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 CNGA2Q16280 664 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 CCDC142Q17RM4 750 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 PPP1R15BQ5SWA1 713 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 CCDC50Q8IVM0 306 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 RNF169Q8NCN4 708 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 C3orf20Q8ND61 904 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 MAGOHBQ96A72 148 aaKnown RBP17.28■□□□□ 0.36
MBD1-210ENST00000457839 GAD1Q99259 594 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 FAM118BQ9BPY3 351 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
MBD1-210ENST00000457839 GOLGA6L10A0A0M3HER8 536 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 KPNA7A9QM74 516 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 H3BQF6 201 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 DAPK3O43293 454 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 KCNE1P15382 129 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 ITGA7Q13683 1181 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 HLTFQ14527 1009 aaKnown RBP eCLIP17.27■□□□□ 0.36
MBD1-210ENST00000457839 ZFYVE27Q5T4F4 411 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 XYLT1Q86Y38 959 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 LRRC52Q8N7C0 313 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 C1orf54Q8WWF1 131 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 PIWIL1Q96J94 861 aaKnown RBP17.27■□□□□ 0.36
MBD1-210ENST00000457839 IP6K2Q9UHH9 426 aa17.27■□□□□ 0.36
MBD1-210ENST00000457839 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
MBD1-210ENST00000457839 A8MXQ7 604 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.35
MBD1-210ENST00000457839 KRT3P12035 628 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 DR1Q01658 176 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 SIX1Q15475 284 aaPredicted RBP17.27■□□□□ 0.35
MBD1-210ENST00000457839 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 XKR4Q5GH76 650 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 GSTCDQ8NEC7 633 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 RNF25Q96BH1 459 aaPredicted RBP17.27■□□□□ 0.35
MBD1-210ENST00000457839 NEUROG2Q9H2A3 272 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 SLITRK6Q9H5Y7 841 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.35
MBD1-210ENST00000457839 PADI3Q9ULW8 664 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 NOD1Q9Y239 953 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.35
MBD1-210ENST00000457839 RALGAPA2Q2PPJ7 1873 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 POLR3GO15318 223 aaPredicted RBP17.26■□□□□ 0.35
MBD1-210ENST00000457839 MGEA5O60502 916 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 PFKMP08237 780 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 VEGFBP49765 207 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 FAM193AP78312 1265 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 NKX3-2P78367 333 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 MGAT3Q09327 533 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 SNX1Q13596 522 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 PPP1R2P3Q6NXS1 205 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 RHOT1Q8IXI2 618 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 TSEN2Q8NCE0 465 aaKnown RBP17.26■□□□□ 0.35
MBD1-210ENST00000457839 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 KBTBD7Q8WVZ9 684 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 MIOSQ9NXC5 875 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 HPCAL4Q9UM19 191 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
MBD1-210ENST00000457839 GRAP2O75791 330 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 CD4P01730 458 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 ACLYP53396 1101 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 EPHB4P54760 987 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
MBD1-210ENST00000457839 RIN2Q8WYP3 895 aaPredicted RBP17.26■□□□□ 0.35
MBD1-210ENST00000457839 E5RJQ4 531 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 RALAP11233 206 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 CCDC130P13994 396 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 ECHS1P30084 290 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 APLP1P51693 650 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 LILRA4P59901 499 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 PMF1Q6P1K2 205 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 CCDC137Q6PK04 289 aaKnown RBP17.25■□□□□ 0.35
MBD1-210ENST00000457839 LCLAT1Q6UWP7 414 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
MBD1-210ENST00000457839 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 PHF2O75151 1096 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 ADCY2Q08462 1091 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 RNF180Q86T96 592 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 PCSK9Q8NBP7 692 aaKnown RBP17.25■□□□□ 0.35
MBD1-210ENST00000457839 RUBCNQ92622 972 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
MBD1-210ENST00000457839 TRPV6Q9H1D0 765 aa17.25■□□□□ 0.35
MBD1-210ENST00000457839 CHST7Q9NS84 486 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms