RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 DARS2Q6PI48 645 aaKnown RBP17.14■□□□□ 0.33
LSS-205ENST00000457828 LVRNQ6Q4G3 990 aa17.14■□□□□ 0.33
LSS-205ENST00000457828 KRT10P13645 584 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 TSPY1Q01534 308 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 SREK1Q8WXA9 508 aaKnown RBP17.13■□□□□ 0.33
LSS-205ENST00000457828 CCT6BQ92526 530 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 BTBD7Q9P203 1132 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
LSS-205ENST00000457828 CCDC195A0A1B0GUA6 201 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 CALCAP01258 141 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 SNHG28P0DPA3 235 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 PSMA2P25787 234 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 SNX9Q9Y5X1 595 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
LSS-205ENST00000457828 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 A0A087WZ62 844 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 SLITRK3O94933 977 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
LSS-205ENST00000457828 BIRC2Q13490 618 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 HIF1AQ16665 826 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 C11orf63Q6NUN7 778 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 NOTUMQ6P988 496 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 EXOC3L1Q86VI1 746 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 ERICH1Q86X53 443 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 HSPH1Q92598 858 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 APBA2Q99767 749 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
LSS-205ENST00000457828 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
LSS-205ENST00000457828 A8MXQ7 604 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 NPTXRO95502 500 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 NUDT17P0C025 328 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 NPTX2P47972 431 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 NOP14P78316 857 aaKnown RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 KPNA6O60684 536 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 TOM1L1O75674 476 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 RASSF9O75901 435 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 ITGB5P18084 799 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 RARRES1P49788 294 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 RRP1BQ14684 758 aaKnown RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 GRIK4Q16099 956 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 CD99L2Q8TCZ2 262 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 DNAJB3Q8WWF6 145 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 KLK14Q9P0G3 267 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 AJAP1Q9UKB5 411 aaPredicted RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 MMP13P45452 471 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 CPA2P48052 419 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 XRCC4Q13426 336 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 SYDE1Q6ZW31 735 aaPredicted RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 C17orf75Q9HAS0 396 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 PRG3Q9Y2Y8 225 aaPredicted RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 NOP9Q86U38 636 aaKnown RBP17.12■□□□□ 0.33
LSS-205ENST00000457828 RASGEF1CQ8N431 466 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 VCX3BQ9H321 246 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 WHRNQ9P202 907 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 TBX20Q9UMR3 447 aa17.12■□□□□ 0.33
LSS-205ENST00000457828 ATRNL1Q5VV63 1379 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 COPEO14579 308 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 PLA2G6O60733 806 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 ATP9AO75110 1047 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 STAMBPO95630 424 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 CPB1P15086 417 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 SLC1A1P43005 524 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 KLC1Q07866 573 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 TMEM132DQ14C87 1099 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 SMAD1Q15797 465 aaKnown RBP17.11■□□□□ 0.33
LSS-205ENST00000457828 ACAD10Q6JQN1 1059 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
LSS-205ENST00000457828 DNAJC9Q8WXX5 260 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 SLC13A1Q9BZW2 595 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 BFSP2Q13515 415 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 KYAT1Q16773 422 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 TMEM154Q6P9G4 183 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 RNF139Q8WU17 664 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 MAGEB18Q96M61 343 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 DLGAP2Q9P1A6 1054 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 SMG5Q9UPR3 1016 aaKnown RBP17.11■□□□□ 0.33
LSS-205ENST00000457828 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 TCRBV7S2A1N4TA0A589 114 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 TADA2AO75478 443 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 CYP3A4P08684 503 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 GZMAP12544 262 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 RAG1P15918 1043 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 KRT4P19013 534 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms