RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ENDOVQ8N8Q3 282 aaKnown RBP14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SEPT1Q8WYJ6 367 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 FAM118BQ9BPY3 351 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SYT11Q9BT88 431 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CDC42EP4Q9H3Q1 356 aaKnown RBP14.3□□□□□ -0.12
TOP3B-213ENST00000457179 PPP2R3BQ9Y5P8 575 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 DOCK5Q9H7D0 1870 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 KRT19P08727 400 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 MAPTP10636 758 aaKnown RBP14.29□□□□□ -0.12
TOP3B-213ENST00000457179 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-213ENST00000457179 DSTYKQ6XUX3 929 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 TAS1R3Q7RTX0 852 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 CROCCP2Q86T23 111 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 RIOX2Q8IUF8 465 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 EPS8L1Q8TE68 723 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 IWS1Q96ST2 819 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 FAM187AA6NFU0 413 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 EDN1P05305 212 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 VPS41P49754 854 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
TOP3B-213ENST00000457179 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 GPD1LQ8N335 351 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 FBXL13Q8NEE6 735 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 SLC7A6OSQ96CW6 309 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-213ENST00000457179 PCYT2Q99447 389 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 NUP85Q9BW27 656 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 VCX3BQ9H321 246 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 VCX3AQ9NNX9 186 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 RAB20Q9NX57 234 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 RBAKQ9NYW8 714 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-213ENST00000457179 LNPEPQ9UIQ6 1025 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 IVNS1ABPQ9Y6Y0 642 aa14.29□□□□□ -0.12
TOP3B-213ENST00000457179 CLDN3O15551 220 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 SPAG7O75391 227 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 LYPLA2O95372 231 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PYGMP11217 842 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PIK3CAP42336 1068 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 NCKAP1LP55160 1127 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 USP46P62068 366 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 GPC5P78333 572 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 KIF22Q14807 665 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CEP128Q6ZU80 1094 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CPA5Q8WXQ8 436 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 STRA6Q9BX79 667 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 ATXN10Q9UBB4 475 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 BLOC1S6Q9UL45 172 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 AGTPBP1Q9UPW5 1226 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CCL15-CCL14A0A0B4J2E2 113 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 A0A0G2JLL6 359 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 HNRNPRO43390 633 aaKnown RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 DKC1O60832 514 aaKnown RBP eCLIP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CHRNB2P17787 502 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 TAC1P20366 129 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 ORC1Q13415 861 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CCL15Q16663 113 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PRRT2Q7Z6L0 340 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CYP4X1Q8N118 509 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 SUDS3Q9H7L9 328 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF232Q9UNY5 417 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 NCANO14594 1321 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 MAGEA13PA6NCF6 341 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PDHXO00330 501 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 MAPK13O15264 365 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 B4GALT5O43286 388 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 STBD1O95210 358 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 RARGP13631 454 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 MAGEA8P43361 318 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 CDR2Q01850 454 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 KPNB1Q14974 876 aaKnown RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 WASHC2DQ5SRD0 308 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 LRRC74BQ6ZQY2 392 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 PPFIBP2Q8ND30 876 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF564Q8TBZ8 553 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-213ENST00000457179 RNPEPQ9H4A4 650 aa14.28□□□□□ -0.12
TOP3B-213ENST00000457179 UBE4BO95155 1302 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 PTPRJQ12913 1337 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 SOCS7O14512 581 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 CYP1A1P04798 512 aaPredicted RBP14.27□□□□□ -0.12
TOP3B-213ENST00000457179 FAM200BP0CF97 657 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 T-ENOLP0DO92 83 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 OSBPP22059 807 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 ADCYAP1R1P41586 468 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 RASSF2P50749 326 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 NEK3P51956 506 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 SH3D19Q5HYK7 790 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 PRAMEF19Q5SWL8 479 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 NOL9Q5SY16 702 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms