RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SUN2Q9UH99 717 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NOX1Q9Y5S8 564 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ASH1LQ9NR48 2969 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 C15orf38-AP3S2A0A0A6YYH1 394 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TSPY2A6NKD2 308 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 E7ENQ6 273 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TCEA3O75764 348 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TTLL1O95922 423 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF26P17031 533 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 EPHA3P29320 983 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 QARSP47897 775 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 JAG1P78504 1218 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 OGDHQ02218 1023 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 AP1B1Q10567 949 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ITGA7Q13683 1181 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SEPT2Q15019 361 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SF3B4Q15427 424 aaKnown RBP eCLIP4.78□□□□□ -1.648e-9■■■■■ 39.1
DEPDC1-202ENST00000456315 STILQ15468 1287 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 WASHC2DQ5SRD0 308 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC70Q6NSX1 233 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CLEC4GQ6UXB4 293 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FASTKD5Q7L8L6 764 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ARPINQ7Z6K5 226 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ANKMY2Q8IV38 441 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SLF2Q8IX21 1173 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 OLAHQ9NV23 265 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF358Q9NW07 568 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 COL12A1Q99715 3063 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 F5H6K3 240 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF195O14628 629 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RAD21O60216 631 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ATE1O95260 518 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MAP3K6O95382 1288 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RALAP11233 206 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 HDCP19113 662 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 KLRC2P26717 231 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 GRIA3P42263 894 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CLK2P49760 499 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CLCN2P51788 898 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SNAP25P60880 206 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ATP11AP98196 1134 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 IFITM2Q01629 132 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 BST1Q10588 318 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TMED2Q15363 201 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SIAH1Q8IUQ4 282 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ARFGAP1Q8N6T3 406 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 OR6Y1Q8NGX8 325 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 DCPSQ96C86 337 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TRAPPC9Q96Q05 1148 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MUC3BQ9H195 1237 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MAN1C1Q9NR34 630 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FBXO3Q9UK99 471 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 AMFRQ9UKV5 643 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF148Q9UQR1 794 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 K7EPI3 171 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 EIF3FO00303 357 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 GYG2O15488 501 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 FKBP6O75344 327 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 AMHP03971 560 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 MYL2P10916 166 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 BMXP51813 675 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 RAP1GDS1P52306 607 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 NFIXQ14938 502 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 CNNM4Q6P4Q7 775 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 TRMT10BQ6PF06 316 aaKnown RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 VASH1Q7L8A9 365 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 FNDC8Q8TC99 324 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC127Q96BQ5 260 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 ACO2Q99798 780 aaKnown RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 DCLK3Q9C098 648 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 ZHX3Q9H4I2 956 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 ZDHHC7Q9NXF8 308 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 GTF3C4Q9UKN8 822 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 HES2Q9Y543 173 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 PCDHAC2Q9Y5I4 1007 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 QSER1Q2KHR3 1735 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 BICDL2A1A5D9 508 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 FBP2O00757 339 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 B4GAT1O43505 415 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 BGNP21810 368 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 SULT2A1Q06520 285 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 TCHHL1Q5QJ38 904 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP4A22Q5TCH4 519 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 TRMT1LQ7Z2T5 733 aaKnown RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 AMIGO2Q86SJ2 522 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 ZBED8Q8IZ13 594 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 ALOXE3Q9BYJ1 711 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC2A11Q9BYW1 496 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 RANBP17Q9H2T7 1088 aaKnown RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 TRABDQ9H4I3 376 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 TOPORSQ9NS56 1045 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 SACM1LQ9NTJ5 587 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 EBF1Q9UH73 591 aa4.77□□□□□ -1.65
DEPDC1-202ENST00000456315 POMPQ9Y244 141 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms