RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 DPH6Q7L8W6 267 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 OTOP3Q7RTS5 596 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 FRMD5Q7Z6J6 570 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 SPATA2LQ8IUW3 424 aaPredicted RBP7.55□□□□□ -1.2
COMMD1-205ENST00000455659 B3GALNT2Q8NCR0 500 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 FBXL13Q8NEE6 735 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 ING5Q8WYH8 240 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 PKMYT1Q99640 499 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 ACBD6Q9BR61 282 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 DPEP3Q9H4B8 488 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 APOBEC3GQ9HC16 384 aaKnown RBP7.55□□□□□ -1.2
COMMD1-205ENST00000455659 ABCB6Q9NP58 842 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 TMLHEQ9NVH6 421 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 HCFC1R1Q9NWW0 138 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 HMGXB4Q9UGU5 601 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 USTQ9Y2C2 406 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 PCDHB5Q9Y5E4 795 aa7.55□□□□□ -1.2
COMMD1-205ENST00000455659 ATP8B3O60423 1300 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 C19orf67A6NJJ6 358 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 A8MXQ7 604 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 LOC730098B7Z3J9 87 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 DLL1O00548 723 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 AFPP02771 609 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CEBPBP17676 345 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CD58P19256 250 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 FMO5P49326 533 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 EPHB3P54753 998 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 INCA1Q0VD86 236 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CETN1Q12798 172 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ORC1Q13415 861 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 SLC5A9Q2M3M2 681 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 SASS6Q6UVJ0 657 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 FILIP1Q7Z7B0 1213 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ITIH5Q86UX2 942 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 LRRTM3Q86VH5 581 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 FAM114A1Q8IWE2 563 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 TRIM59Q8IWR1 403 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 LEMD2Q8NC56 503 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 STKLD1Q8NE28 680 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 SEMA4DQ92854 862 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 PCED1BQ96HM7 432 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 FUBP3Q96I24 572 aaKnown RBP eCLIP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 GCNAQ96QF7 691 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MYADMQ96S97 322 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ARID3AQ99856 593 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ELOVL4Q9GZR5 314 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 KRT82Q9NSB4 513 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 RAB20Q9NX57 234 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 DNMT3BQ9UBC3 853 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 HSFX1Q9UBD0 423 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MAGEC2Q9UBF1 373 aaPredicted RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MUTYHQ9UIF7 546 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MRPS23Q9Y3D9 190 aaKnown RBP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 NME7Q9Y5B8 376 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
COMMD1-205ENST00000455659 TICRRQ7Z2Z1 1910 aa7.54□□□□□ -1.2
COMMD1-205ENST00000455659 MUC6Q6W4X9 2439 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 ZNF318Q5VUA4 2279 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 MYBPHLA2RUH7 354 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 TRIM66O15016 1216 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 DCXO43602 365 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 ATP2C2O75185 946 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 PDGFRBP09619 1106 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 HAPLN1P10915 354 aaPredicted RBP7.53□□□□□ -1.2
COMMD1-205ENST00000455659 MYL4P12829 197 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 CCDC130P13994 396 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 PTMSP20962 102 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 CYP2F1P24903 491 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 LMO2P25791 158 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 ANXA13P27216 316 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 ERCC5P28715 1186 aaPredicted RBP7.53□□□□□ -1.2
COMMD1-205ENST00000455659 GNL1P36915 607 aaPredicted RBP7.53□□□□□ -1.2
COMMD1-205ENST00000455659 MTIF2P46199 727 aaKnown RBP7.53□□□□□ -1.2
COMMD1-205ENST00000455659 TUFMP49411 452 aaKnown RBP7.53□□□□□ -1.2
COMMD1-205ENST00000455659 GPR15P49685 360 aa7.53□□□□□ -1.2
COMMD1-205ENST00000455659 NDST1P52848 882 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms