RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 DENND4CQ5VZ89 1909 aa18.98■□□□□ 0.63
CCDC144B-204ENST00000455629 ADSSP30520 456 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 TSPY1Q01534 308 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 TNK2Q07912 1038 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 DMWDQ09019 674 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 NFE2Q16621 373 aaPredicted RBP18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 GIPC2Q8TF65 315 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 EPSTI1Q96J88 318 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 MRPL44Q9H9J2 332 aaKnown RBP18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 PCDHB5Q9Y5E4 795 aa18.97■□□□□ 0.63
CCDC144B-204ENST00000455629 SPTLC2O15270 562 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 FOXD2O60548 495 aaPredicted RBP18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 GAP43P17677 238 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 AVPR1AP37288 418 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 NLRP12P59046 1061 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 CSRP2Q16527 193 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 DYMQ7RTS9 669 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 NETO1Q8TDF5 533 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 FAM83CQ9BQN1 747 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 SMG9Q9H0W8 520 aaKnown RBP18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 KIF9Q9HAQ2 790 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 SEMA4GQ9NTN9 838 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 FBXO2Q9UK22 296 aaPredicted RBP18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 RCOR1Q9UKL0 485 aa18.96■□□□□ 0.63
CCDC144B-204ENST00000455629 ZNF638Q14966 1978 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 RALGAPA1Q6GYQ0 2036 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 TPRP12270 2363 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 PPP6R2O75170 966 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 F11P03951 625 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 HMGA1P17096 107 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 CDR1P51861 262 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 HEATR6Q6AI08 1181 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 TMEM150AQ86TG1 271 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 WDR5BQ86VZ2 330 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 MAB21L3Q8N8X9 362 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 CACTINQ8WUQ7 758 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 LEO1Q8WVC0 666 aaPredicted RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 ACCSQ96QU6 501 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 FAM213AQ9BRX8 229 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 IKZF4Q9H2S9 585 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 ABCB6Q9NP58 842 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 GKN1Q9NS71 199 aa18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.95■□□□□ 0.62
CCDC144B-204ENST00000455629 EPG5Q9HCE0 2579 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 DCDC2BA2VCK2 349 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 LDHAP00338 332 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 CSH1P0DML2 217 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 CSH2P0DML3 217 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 TXLNAP40222 546 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 TFAMQ00059 246 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 AMPD2Q01433 879 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 GRSF1Q12849 480 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 BFSP1Q12934 665 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 SRSF5Q13243 272 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 RUNX3Q13761 415 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 TMEM196Q5HYL7 178 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 L1TD1Q5T7N2 865 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 RRAGBQ5VZM2 374 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 SV2BQ7L1I2 683 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 BRSK2Q8IWQ3 736 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 TMEM86AQ8N2M4 240 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 USP13Q92995 863 aaPredicted RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 SPATA32Q96LK8 384 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 ACBD6Q9BR61 282 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 SCAND2PQ9GZW5 306 aaPredicted RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 OLFML3Q9NRN5 406 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 TDP1Q9NUW8 608 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 C2orf42Q9NWW7 574 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 PCDHB13Q9Y5F0 798 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 SRPRBQ9Y5M8 271 aaKnown RBP18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 OBSL1O75147 1896 aa18.94■□□□□ 0.62
CCDC144B-204ENST00000455629 ACACBO00763 2458 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 MYMKA6NI61 221 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 SLC30A4O14863 429 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 HUS1O60921 280 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 ATG13O75143 517 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 PRPF40AO75400 957 aaKnown RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 GARTP22102 1010 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 POLR2BP30876 1174 aaKnown RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 RPL10AP62906 217 aaKnown RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 KCNA1Q09470 495 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 ALCAMQ13740 583 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 ZNF268Q14587 947 aaPredicted RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 CC2D1AQ6P1N0 951 aaPredicted RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 PRR23CQ6ZRP0 262 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 CEP68Q76N32 757 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 MON1AQ86VX9 555 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 PDCL2Q8N4E4 241 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 FAM160A2Q8N612 972 aaPredicted RBP18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 LRRC52Q8N7C0 313 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 SPATA18Q8TC71 538 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 DNAJC19Q96DA6 116 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 PI4K2AQ9BTU6 479 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 HPS4Q9NQG7 708 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 TMLHEQ9NVH6 421 aa18.93■□□□□ 0.62
CCDC144B-204ENST00000455629 UXTQ9UBK9 157 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms