RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CDCA2Q69YH5 1023 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 PPP1R2P3Q6NXS1 205 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 KCNN1Q92952 543 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 FAM167AQ96KS9 214 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 CSADQ9Y600 493 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 PIK3R2O00459 728 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 UBOX5O94941 541 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 NFICP08651 508 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 CD48P09326 243 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 KRT3P12035 628 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 PPP1R15BQ5SWA1 713 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 LGALS13Q9UHV8 139 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
SEMA4D-213ENST00000455551 GHRP10912 638 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 GDF10P55107 478 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 NLGN2Q8NFZ4 835 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 TCP11Q8WWU5 503 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 P3H4Q92791 437 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 TCEA3O75764 348 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 KRT15P19012 456 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 OTUD4Q01804 1114 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 TBC1D1Q86TI0 1168 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 TWNKQ96RR1 684 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 CPXM1Q96SM3 734 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 MGAMO43451 1857 aa12.88□□□□□ -0.35
SEMA4D-213ENST00000455551 CST8O60676 142 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 LRCH4O75427 683 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 IQCF3P0C7M6 154 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 TGFB3P10600 412 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 GCAP28676 217 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 NRLP54845 237 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 TAF5Q15542 800 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 LRRC38Q5VT99 294 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 EFCAB12Q6NXP0 572 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SGSM3Q96HU1 749 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 CDT1Q9H211 546 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 LTBP3Q9NS15 1303 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ZNF667Q5HYK9 610 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 RNASEH2BQ5TBB1 312 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ANKRD22Q5VYY1 191 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 HSPH1Q92598 858 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SLC12A4Q9UP95 1085 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ACKR2O00590 384 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SOCS7O14512 581 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SUN1O94901 812 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 OAS1P00973 400 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ERBB2P04626 1255 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ITGB3P05106 788 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 FOXN2P32314 431 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 GRM1Q13255 1194 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 Q3C1V9 767 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 SYCP2LQ5T4T6 812 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 MAML1Q92585 1016 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 PTPRFP10586 1907 aa12.87□□□□□ -0.35
SEMA4D-213ENST00000455551 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 XRCC4Q13426 336 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 TSHZ1Q6ZSZ6 1077 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms