RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 POU5F1Q01860 360 aaKnown RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 DENND2CQ68D51 928 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 MFSD7Q6UXD7 560 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 PRUNE1Q86TP1 453 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 IFNLR1Q8IU57 520 aaPredicted RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 ZMAT2Q96NC0 199 aaKnown RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 MIS12Q9H081 205 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 SPC25Q9HBM1 224 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 GOLGA2P5Q9HBQ8 144 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 TSPAN16Q9UKR8 245 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 LRRC37A2A6NM11 1700 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 ATF2P15336 505 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 ADORA2BP29275 332 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 HOXA11P31270 313 aaPredicted RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 PSMC4P43686 418 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 OGDHQ02218 1023 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 SNX17Q15036 470 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 HADHQ16836 314 aaKnown RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 GOLGA7BQ2TAP0 167 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 TTMPQ5BVD1 217 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 TXNRD3NBQ6F5E7 133 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 TMC3Q7Z5M5 1100 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 IQCKQ8N0W5 287 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 TMEM40Q8WWA1 233 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 CALN1Q9BXU9 219 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 ADAMTS10Q9H324 1103 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 FSCN2O14926 492 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 PAEPP09466 180 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 ATP11AP98196 1134 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 PIGHQ14442 188 aaPredicted RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 C3orf20Q8ND61 904 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 RBM41Q96IZ5 413 aaKnown RBP14.42□□□□□ -0.1
CLK3-203ENST00000454830 ZIC5Q96T25 663 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 CYP3A43Q9HB55 503 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 CYTH4Q9UIA0 394 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 RARBP10826 455 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 VDRP11473 427 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 GNAT1P11488 350 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 PTGIRP43119 386 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 CDC42EP1Q00587 391 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 GRK7Q8WTQ7 553 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLK3-203ENST00000454830 LPIN3Q9BQK8 851 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 MRPL45Q9BRJ2 306 aaKnown RBP14.41□□□□□ -0.1
CLK3-203ENST00000454830 KATNAL1Q9BW62 490 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLK3-203ENST00000454830 PCYOX1Q9UHG3 505 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 ERBB2P04626 1255 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 AKR1A1P14550 325 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 SLCO1A2P46721 670 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 FNTAP49354 379 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 PMS2P54278 862 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 HIC1Q14526 733 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 RUNDC3BQ96NL0 473 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 ARHGAP39Q9C0H5 1083 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
CLK3-203ENST00000454830 PCDHGC3Q9UN70 934 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 GPR32O75388 356 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 C17orf99Q6UX52 265 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 EXD1Q8NHP7 514 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 SOCS4Q8WXH5 440 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 DCLK3Q9C098 648 aa14.41□□□□□ -0.1
CLK3-203ENST00000454830 NGRNQ9NPE2 291 aaKnown RBP14.41□□□□□ -0.1
CLK3-203ENST00000454830 MYADML2A6NDP7 307 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 GNGT1P63211 74 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 PDCLQ13371 301 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 UAP1Q16222 522 aaPredicted RBP14.4□□□□□ -0.1
CLK3-203ENST00000454830 RAPGEF5Q92565 580 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 ZMYND15Q9H091 742 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 HCRTO43612 131 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 TJP3O95049 919 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 TAP1Q03518 808 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 MFSD14CQ5VZR4 134 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 CD302Q8IX05 232 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 RCOR2Q8IZ40 523 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 KCTD6Q8NC69 237 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 ATL2Q8NHH9 583 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 FAM107BQ9H098 131 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 NOD1Q9Y239 953 aa14.4□□□□□ -0.1
CLK3-203ENST00000454830 E5RJQ4 531 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 ACSL3O95573 720 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 SREBF2Q12772 1141 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 MREGQ8N565 214 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
CLK3-203ENST00000454830 ANAPC5Q9UJX4 755 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
CLK3-203ENST00000454830 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLK3-203ENST00000454830 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 RFX6Q8HWS3 928 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 PIK3R5Q8WYR1 880 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 LRRC19Q9H756 370 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 UBQLN1Q9UMX0 589 aaKnown RBP14.39□□□□□ -0.11
CLK3-203ENST00000454830 TRIP12Q14669 1992 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms