RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DPP3Q9NY33 737 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GCNT4Q9P109 453 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 METRNQ9UJH8 293 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ARHGEF37A1IGU5 675 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 LRRIQ4A6NIV6 560 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 HNRNPDLO14979 420 aaKnown RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 GJB5O95377 273 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GZMAP12544 262 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CSF2RAP15509 400 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TCF3P15923 654 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 MLH1P40692 756 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 SLC11A1P49279 550 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 VAV2P52735 878 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 SLC18A3Q16572 532 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 C9orf50Q5SZB4 431 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 MEI1Q5TIA1 1274 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 AFMIDQ63HM1 303 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TMEM92Q6UXU6 159 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ENOSF1Q7L5Y1 443 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GPRIN1Q7Z2K8 1008 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 UNC93AQ86WB7 457 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ZNF677Q86XU0 584 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 FAM114A1Q8IWE2 563 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 RIN3Q8TB24 985 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 PIK3R5Q8WYR1 880 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ZNF668Q96K58 619 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 PACSIN1Q9BY11 444 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 PNPLA8Q9NP80 782 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 FNIP2Q9P278 1114 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 NAGPAQ9UK23 515 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 BACE2Q9Y5Z0 518 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 EPN1Q9Y6I3 576 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 ATP8B1O43520 1251 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SLU7O95391 586 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 GHRP10912 638 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 HOXC13P31276 330 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MYL7Q01449 175 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CDR2Q01850 454 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SLC25A11Q02978 314 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 PAK2Q13177 524 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 KLF1Q13351 362 aaPredicted RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 TUSC3Q13454 348 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SURF1Q15526 300 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 PRSS36Q5K4E3 855 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MMGT1Q8N4V1 131 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 COLGALT1Q8NBJ5 622 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ARHGEF26Q96DR7 871 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 HES6Q96HZ4 224 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MYRFLQ96LU7 910 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 HNRNPABQ99729 332 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 SH3GL2Q99962 352 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 B3GNT5Q9BYG0 378 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 GPR62Q9BZJ7 368 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 INO80BQ9C086 356 aaPredicted RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 OSER1Q9NX31 292 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MTMR10Q9NXD2 777 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MTRRQ9UBK8 725 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 TARSL2A2RTX5 802 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 KBTBD13C9JR72 458 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 TULP2O00295 520 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 N4BP1O75113 896 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 ATP1A1P05023 1023 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 HMGA1P17096 107 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 ATF6P18850 670 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 IL4RP24394 825 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 RPL13P26373 211 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 CYP2J2P51589 502 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 NOP14P78316 857 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 IGBP1P78318 339 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 NCOA4Q13772 614 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CTC1Q2NKJ3 1217 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SGSM1Q2NKQ1 1148 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 RTP2Q5QGT7 225 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 XYLT1Q86Y38 959 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ZBTB8OSQ8IWT0 167 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 AENQ8WTP8 325 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 ANP32BQ92688 251 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 SMOQ99835 787 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ADAM2Q99965 735 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 GORASP1Q9BQQ3 440 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CLSTN3Q9BQT9 956 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CDC23Q9UJX2 597 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 PRDM4Q9UKN5 801 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CEP192Q8TEP8 1941 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 AGPSO00116 658 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CCP110O43303 1012 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 KIF20AO95235 890 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SERPINC1P01008 464 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 IDEP14735 1019 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 TMOD1P28289 359 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ERVK-21P61565 698 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 DRAP1Q14919 205 aaPredicted RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 CFAP221Q4G0U5 840 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 RAB6CQ53S08 254 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 TNFAIP8L3Q5GJ75 292 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms